RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 H1FXQ92522 213 aaKnown RBP3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 RBPMSQ93062 196 aaKnown RBP3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 LSM10Q969L4 123 aaKnown RBP3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 RRNAD1Q96FB5 475 aaKnown RBP3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 NEIL1Q96FI4 390 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 ADTRPQ96IZ2 230 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR10C1Q96KK4 312 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 ZNF714Q96N38 554 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 BBC3Q96PG8 261 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR8B2Q96RD0 313 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 TP53RKQ96S44 253 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 S1PR3Q99500 378 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 AIFM2Q9BRQ8 373 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 AGMATQ9BSE5 352 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 DCTN5Q9BTE1 182 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 MFFQ9GZY8 342 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR2D2Q9H210 308 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 UBTD1Q9HAC8 227 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 DCAF16Q9NXF7 216 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 GSKIPQ9P0R6 139 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 RPUSD1Q9UJJ7 312 aaKnown RBP3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 ITGB1BP2Q9UKP3 347 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 RNF150Q9ULK6 438 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 PAIP2BQ9ULR5 123 aaKnown RBP3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 PSG11Q9UQ72 335 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 PRELID3BQ9Y3B1 194 aa3.27□□□□□ -1.89
HMGB1P37-201ENST00000439613 SMG1Q96Q15 3661 aaKnown RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 GCN1Q92616 2671 aaKnown RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 IGHV3-43A0A0B4J1X8 118 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 A0A1B0GW55 424 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 KANTRA0A1W2PQU2 76 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 CLEC18AA5D8T8 446 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 C17orf98A8MV24 154 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 E5RGE8 158 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 G3V3Q6 166 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 OVOL3O00110 214 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 CCSO14618 274 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 TOR1AO14656 332 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 ARPC5O15511 151 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 ST8SIA3O43173 380 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 RBFOX2O43251 390 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 TNFSF12O43508 249 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 C1QL1O75973 258 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 LY86O95711 162 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 IFNA7P01567 189 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 IGLV2-14P01704 120 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 PRB1P04280 392 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 DUX4L2P0CJ85 424 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 DUX4L3P0CJ86 424 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 DUX4L4P0CJ87 422 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 DUX4L5P0CJ88 424 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 DUX4L6P0CJ89 424 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 DUX4L7P0CJ90 424 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 IGHV3-43DP0DP04 118 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 LYL1P12980 280 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 SELLP14151 372 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 MMP9P14780 707 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 COX6B1P14854 86 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 PVALBP20472 110 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 NFYBP25208 207 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 IL3RAP26951 378 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 LPAR6P43657 344 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 NKX2-1P43699 371 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 GPR6P46095 362 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 THBS3P49746 956 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 PRRX1P54821 245 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 LGALS4P56470 323 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 IL15RAQ13261 267 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 EIF4EBP1Q13541 118 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 GNMTQ14749 295 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 OPCMLQ14982 345 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 Q5BKY6 102 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 NMSQ5H8A3 153 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 GPR157Q5UAW9 335 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 DUX4L9Q6RFH8 374 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 LYPD2Q6UXB3 125 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 TMUB2Q71RG4 321 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 BCL6BQ8N143 479 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 KCNRGQ8N5I3 272 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 FAM71E2Q8N5Q1 922 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 LINC00311Q8N616 119 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 SLC35G3Q8N808 338 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 CLEC18CQ8NCF0 446 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR11H4Q8NGC9 324 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 OR51H1Q8NH63 302 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 GRPEL2Q8TAA5 225 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 C8orf46Q8TAG6 207 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 TCTEX1D2Q8WW35 142 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 ABHD14AQ9BUJ0 271 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 PARP12Q9H0J9 701 aaKnown RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 PLEKHA2Q9HB19 425 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 PATZ1Q9HBE1 687 aaKnown RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 BARX1Q9HBU1 254 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 C19orf12Q9NSK7 152 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 SDHAF2Q9NX18 166 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 COA4Q9NYJ1 87 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 DUX4Q9UBX2 424 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 TNFSF18Q9UNG2 199 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 NSG2Q9Y328 171 aa3.26□□□□□ -1.89
HMGB1P37-201ENST00000439613 APCP25054 2843 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms