RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 FAM90A7PA6NKC0 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A22PA8MWA6 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A12PA8MX19 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A5PA8MXJ8 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A23PA8MXZ1 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A15PP0C7V4 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A13PP0C7W8 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A14PP0C7W9 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 FAM90A24PP0C7X0 464 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 G0S2P27469 103 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 CTF1Q16619 201 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 ADAD2Q8NCV1 583 aaKnown RBP10.29□□□□□ -0.76
NEK1-201ENST00000439128 AQP3Q92482 292 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 LSM10Q969L4 123 aaKnown RBP10.29□□□□□ -0.76
NEK1-201ENST00000439128 A0A1B0GVG6 124 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 MPC2O95563 127 aa10.29□□□□□ -0.76
NEK1-201ENST00000439128 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
NEK1-201ENST00000439128 IGHV1-18A0A0C4DH31 117 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 SPCS3P61009 180 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 SMAGPQ0VAQ4 97 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 CRIM1Q9NZV1 1036 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 NAT8BQ9UHF3 227 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 HPXP02790 462 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 HIST1H1BP16401 226 aaKnown RBP10.28□□□□□ -0.76
NEK1-201ENST00000439128 LINC00299Q6ZSB3 139 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 NRIP2Q9BQI9 281 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 ARPC4-TTLL3A0A0A6YYG9 625 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 MFSD2BA6NFX1 497 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 S1PR2O95136 353 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 FDX2Q6P4F2 183 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 GBGT1Q8N5D6 347 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 TMEM116Q8NCL8 245 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 ABHD1Q96SE0 405 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 SIPA1L1O43166 1804 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 LINC00869P0C866 280 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 SULT1A1P50225 295 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 DSPPQ9NZW4 1301 aa10.28□□□□□ -0.76
NEK1-201ENST00000439128 PSME4Q14997 1843 aa10.27□□□□□ -0.76
NEK1-201ENST00000439128 ZNF236Q9UL36 1845 aa10.27□□□□□ -0.76
NEK1-201ENST00000439128 B4DSR2 109 aa10.27□□□□□ -0.76
NEK1-201ENST00000439128 SEC16AO15027 2179 aa10.27□□□□□ -0.76
NEK1-201ENST00000439128 HSBP1O75506 76 aa10.27□□□□□ -0.76
NEK1-201ENST00000439128 Q5PR19 223 aa10.27□□□□□ -0.76
NEK1-201ENST00000439128 TUBD1Q9UJT1 453 aa10.27□□□□□ -0.76
NEK1-201ENST00000439128 CACNA1BQ00975 2339 aa10.27□□□□□ -0.76
NEK1-201ENST00000439128 DICER1Q9UPY3 1922 aaKnown RBP10.27□□□□□ -0.77
NEK1-201ENST00000439128 PTTG1IPP53801 180 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 RPL39P5Q59GN2 51 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 GTSCR1Q86UQ5 136 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 ZNF837Q96EG3 531 aaPredicted RBP10.27□□□□□ -0.77
NEK1-201ENST00000439128 LURAP1Q96LR2 239 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 FBXL7Q9UJT9 491 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 CACNA1EQ15878 2313 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 RNF223E7ERA6 249 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 TMEM262E9PQX1 116 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 CSN3P07498 182 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 COMPP49747 757 aaPredicted RBP10.27□□□□□ -0.77
NEK1-201ENST00000439128 MEOX2P50222 304 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 UBE2V2Q15819 145 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 ZNF672Q499Z4 452 aaPredicted RBP10.27□□□□□ -0.77
NEK1-201ENST00000439128 MOSP00540 346 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 GPX1P07203 203 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 TMEM241Q24JQ0 296 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 NPVFQ9HCQ7 196 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 LOC390937A0A1W2PQ73 354 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 TM4SF5O14894 197 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 IGF2P01344 180 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 TCL1AP56279 114 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 ARPC1AQ92747 370 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 ZNF586Q9NXT0 402 aa10.27□□□□□ -0.77
NEK1-201ENST00000439128 C11orf94C9JXX5 98 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 FSTP19883 344 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 CD33P20138 364 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 PMCHP20382 165 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 HIST1H1AQ02539 215 aaPredicted RBP10.26□□□□□ -0.77
NEK1-201ENST00000439128 ABLIM2Q6H8Q1 611 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 SLC35E4Q6ICL7 350 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 Q6ZS92 163 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 TRAPPC1Q9Y5R8 145 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 EP300Q09472 2414 aaPredicted RBP10.26□□□□□ -0.77
NEK1-201ENST00000439128 OTOFQ9HC10 1997 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 KLF4O43474 513 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 IGHV3-48P01763 117 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 AREGP15514 252 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 GUK1Q16774 197 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 C19orf54Q5BKX5 351 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 FAM210BQ96KR6 192 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 M0QZK8 103 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 RPL7P18124 248 aaKnown RBP10.26□□□□□ -0.77
NEK1-201ENST00000439128 RIGQ13278 110 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 CLEC19AQ6UXS0 136 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 BPIFA4PQ86YQ2 179 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 ZNF430Q9H8G1 570 aaPredicted RBP10.26□□□□□ -0.77
NEK1-201ENST00000439128 IGKV3OR2-268A0A0C4DH90 116 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 HELTA6NFD8 242 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 TCEAL7Q9BRU2 100 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 GSX2Q9BZM3 304 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 MANBALQ9NQG1 85 aa10.26□□□□□ -0.77
NEK1-201ENST00000439128 IQCF6A8MYZ5 107 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms