RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 WDR13Q9H1Z4 485 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF665Q9H7R5 613 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM165Q9HC07 324 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 RAB9BQ9NP90 201 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 MYOZ1Q9NP98 299 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TREM2Q9NZC2 230 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPP1R3CQ9UQK1 317 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 AKAP13Q12802 2813 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 RIF1Q5UIP0 2472 aaKnown RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPIAL4EA0A075B759 164 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 TRAV39A0A0B4J263 110 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGHV1-69-2A0A0G2JMI3 117 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 C9orf170A2RU37 121 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 C5orf51A6NDU8 294 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PGPEP1LA6NFU8 196 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAM25EA8MYX2 175 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 F5H0A9 414 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPIAL4DF5H284 164 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 SMLR1H3BR10 107 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM178BH3BS89 294 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 M0QZ24 198 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 LGALS8O00214 317 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 CCSO14618 274 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 HSD17B6O14756 317 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC22A5O76082 557 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 SFT2D2O95562 160 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 IFNA21P01568 189 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 GYPAP02724 150 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 C1QBP02746 253 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 TFF1P04155 84 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 GIPP09681 153 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 SCTP09683 121 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPIAL4FP0DN26 164 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PSG2P11465 335 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 MUC1P15941 1255 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 AADACP22760 399 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZBTB25P24278 435 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 ERP29P30040 261 aaKnown RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PRDX2P32119 198 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR3A1P47881 315 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPOXP50336 477 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 NKX2-5P52952 324 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PIGPP57054 158 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 SRPXP78539 464 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 AESQ08117 197 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 HMGN3Q15651 99 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 KCNJ8Q15842 424 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 LTC4SQ16873 150 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 HFEQ30201 348 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PHLDA2Q53GA4 152 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGSF11Q5DX21 431 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 AADACL3Q5VUY0 350 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF880Q6PDB4 577 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 C11orf53Q8IXP5 236 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 CMTM1Q8IZ96 169 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF561Q8N587 486 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 SPICQ8N5J4 248 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 CD177Q8N6Q3 437 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 DEFB108BQ8NET1 73 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR5D13Q8NGL4 314 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR5M8Q8NGP6 311 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR2T35Q8NGX2 323 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 RNASE11Q8TAA1 199 aaKnown RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 UBALD1Q8TB05 177 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 THAP6Q8TBB0 222 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 MRGPRDQ8TDS7 321 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAM222BQ8WU58 562 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 ASB13Q8WXK3 278 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 MRGPRFQ96AM1 343 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 GALMQ96C23 342 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF486Q96H40 463 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 HYLS1Q96M11 299 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM68Q96MH6 324 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 CABLES2Q9BTV7 478 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 RAB1BQ9H0U4 201 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 ALX4Q9H161 411 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 C5orf66Q9H5L9 145 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 RANBP3Q9H6Z4 567 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 NAA60Q9H7X0 242 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 METTL8Q9H825 291 aaKnown RBP3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 TAF9BQ9HBM6 251 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM106BQ9NUM4 274 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 KIF25Q9UIL4 384 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 GPR132Q9UNW8 380 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 KCNIP3Q9Y2W7 256 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPIAL4AQ9Y536 164 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 APC2O95996 2303 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 PTPRQQ9UMZ3 2332 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 DMDP11532 3685 aa3.1□□□□□ -1.91
HMGB3P20-201ENST00000417997 ACACAQ13085 2346 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGKV1D-17A0A075B6S4 117 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 FXYD6-FXYD2A0A087WZ82 144 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 TRGV10A0A0A0MS01 117 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 TRBV6-7A0A0A0MS04 114 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 A0A0B4J2A0 478 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 PIGBOS1A0A0B4J2F0 54 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGKV3D-20A0A0C4DH25 116 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 C13orf42A0A1B0GVH6 325 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 ODAMA1E959 279 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 CRYM-AS1A6NIL9 109 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms