RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CRYGBP07316 175 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 CAPGP40121 348 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 CEACAM6P40199 344 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 RHOGP84095 191 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 ATP5G2Q06055 141 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 Q499Y3 187 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 OR2G6Q5TZ20 316 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 C6orf201Q7Z4U5 140 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 ADAD2Q8NCV1 583 aaKnown RBP12.46□□□□□ -0.41
CHMP3-203ENST00000409225 OR52B4Q8NGK2 314 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 EDARADDQ8WWZ3 215 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 CACNG8Q8WXS5 425 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 THRSPQ92748 146 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 Q96MT0 163 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 SLC35D1Q9NTN3 355 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 ZNF221Q9UK13 617 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 MSGN1A6NI15 193 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 PPP5D1E7EU14 171 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 EI24O14681 340 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 OGG1O15527 345 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 SPRY2O43597 315 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 TUSC2O75896 110 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 HLA-AP01891 365 aaKnown RBP12.45□□□□□ -0.42
CHMP3-203ENST00000409225 OR9G9P0C7N8 305 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 ETV1P50549 477 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 WFDC3Q8IUB2 231 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 KCNG3Q8TAE7 436 aa12.45□□□□□ -0.42
CHMP3-203ENST00000409225 PHLDA1Q8WV24 401 aaPredicted RBP12.45□□□□□ -0.42
CHMP3-203ENST00000409225 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.44□□□□□ -0.42
CHMP3-203ENST00000409225 FAM223BA6NKX1 122 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 M0R1X1 148 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 MPPED1O15442 326 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 BMI1P35226 326 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 ZNF45Q02386 682 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 DEFB135Q30KP9 77 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 ZNF880Q6PDB4 577 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 TMPRSS11AQ6ZMR5 421 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 FAM223AQ8IWN6 122 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 TMEM61Q8N0U2 210 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 RHOXF1Q8NHV9 184 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
CHMP3-203ENST00000409225 RPL36Q9Y3U8 105 aaKnown RBP12.44□□□□□ -0.42
CHMP3-203ENST00000409225 TRBV5-7A0A0A0MS05 114 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 ATP8B1O43520 1251 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 SCAF4O95104 1147 aaKnown RBP12.43□□□□□ -0.42
CHMP3-203ENST00000409225 NAPSAO96009 420 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 LALBAP00709 142 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 ZBTB25P24278 435 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 RPS11P62280 158 aaKnown RBP eCLIP12.43□□□□□ -0.42
CHMP3-203ENST00000409225 ZNF57Q68EA5 555 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-203ENST00000409225 OR10K2Q6IF99 312 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 MOB1BQ7L9L4 216 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 CDH26Q8IXH8 852 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 ZFP41Q8N8Y5 198 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 MRPS18AQ9NVS2 196 aaKnown RBP12.43□□□□□ -0.42
CHMP3-203ENST00000409225 BABAM2Q9NXR7 383 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 TP53TG1Q9Y2A0 90 aa12.43□□□□□ -0.42
CHMP3-203ENST00000409225 DYNC1I1O14576 645 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 OR2C1O95371 312 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 ATF4P18848 351 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-203ENST00000409225 CBLN1P23435 193 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 HLA-DRB3P79483 266 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 PRR20EP86478 221 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 PRR20CP86479 221 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 PRR20DP86480 221 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 PRR20BP86481 221 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 PRR20AP86496 221 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 TNXAQ16473 311 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 TM4SF20Q53R12 229 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 YIF1BQ5BJH7 314 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 C1orf146Q5VVC0 180 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 FGF20Q9NP95 211 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-203ENST00000409225 MLXQ9UH92 298 aa12.42□□□□□ -0.42
CHMP3-203ENST00000409225 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 SRRM4A7MD48 611 aaKnown RBP12.41□□□□□ -0.42
CHMP3-203ENST00000409225 SHOXO15266 292 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 GGCTO75223 188 aaKnown RBP12.41□□□□□ -0.42
CHMP3-203ENST00000409225 APOC4P55056 127 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 MRGPRG-AS1Q2M3A8 158 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 Q6ZWC4 215 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 TMEM217Q8N7C4 229 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 SRSF12Q8WXF0 261 aaKnown RBP12.41□□□□□ -0.42
CHMP3-203ENST00000409225 PTX4Q96A99 478 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 NICN1Q9BSH3 213 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 HDHD3Q9BSH5 251 aaPredicted RBP12.41□□□□□ -0.42
CHMP3-203ENST00000409225 DMRT1Q9Y5R6 373 aa12.41□□□□□ -0.42
CHMP3-203ENST00000409225 LGALS9O00182 355 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 OR2J3O76001 311 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 SCTP09683 121 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 HTR2CP28335 458 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 RPS27AP62979 156 aaKnown RBP12.4□□□□□ -0.42
CHMP3-203ENST00000409225 CBX3Q13185 183 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 SMN1Q16637 294 aaKnown RBP12.4□□□□□ -0.42
CHMP3-203ENST00000409225 C15orf32Q32M92 178 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 ANKRD55Q3KP44 614 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 APH1BQ8WW43 257 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 PGLYRP3Q96LB9 341 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 UQCC2Q9BRT2 126 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 GHRLQ9UBU3 117 aa12.4□□□□□ -0.42
CHMP3-203ENST00000409225 PKHD1P08F94 4074 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms