RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TMEM241Q24JQ0 296 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 TBC1D28Q2M2D7 210 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 ACTL10Q5JWF8 245 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 Q6P435 159 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 RNF144BQ7Z419 303 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 OR4D5Q8NGN0 318 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 MOB3AQ96BX8 217 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 SDSLQ96GA7 329 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 PRRG4Q9BZD6 226 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 ZNF442Q9H7R0 627 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 ZMAT4Q9H898 229 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 AURKAIP1Q9NWT8 199 aaPredicted RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 CISD1Q9NZ45 108 aaKnown RBP4.52□□□□□ -1.69
VPS41-203ENST00000395969 SLC7A11Q9UPY5 501 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 FAM215AQ9Y5M1 114 aa4.52□□□□□ -1.69
VPS41-203ENST00000395969 SDK1Q7Z5N4 2213 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 IGHV3-15A0A0B4J1V0 119 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 C20orf202A1L168 122 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 NKX2-8O15522 239 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 YPEL1O60688 119 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 LHBP01229 141 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 IGHV3-13P01766 116 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 HBE1P02100 147 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 TMEM225BP0DP42 221 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 CDC34P49427 236 aaPredicted RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 FAM3BP58499 235 aaPredicted RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 RPL23AP62750 156 aaKnown RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 PLGLB1Q02325 96 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ZDHHC23Q8IYP9 409 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 OSR2Q8N2R0 312 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 C8orf31Q8N9H6 132 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 OR5T1Q8NG75 326 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 OR51G1Q8NGK1 321 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 OR52M1Q8NGK5 317 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 TMEM171Q8WVE6 324 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 YPEL2Q96QA6 119 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 MIEN1Q9BRT3 115 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 CENPMQ9NSP4 180 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 FKBP11Q9NYL4 201 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 NAGKQ9UJ70 344 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 A0A1B0GUS0 222 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 A0A1W2PPQ1 181 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 K7EP13 123 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ST8SIA3O43173 380 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 MPIG6BO95866 241 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 HPRT1P00492 218 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 B4GALT1P15291 398 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 GZMHP20718 246 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 DUSP1P28562 367 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 RIPPLY3P57055 190 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 GNG3P63215 75 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ASCL5Q7RTU5 278 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ODF3L1Q8IXM7 274 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 FAM122AQ96E09 287 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ALKBH3Q96Q83 286 aaPredicted RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 P2RX4Q99571 388 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 AGMATQ9BSE5 352 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ST6GALNAC5Q9BVH7 336 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 Q9N2K0 584 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 RBM7Q9Y580 266 aaKnown RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 DOCK7Q96N67 2140 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 IGSF23A1L1A6 192 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 TNFRSF13BO14836 293 aaPredicted RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 LCATP04180 440 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 TYMSP04818 313 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 MC5RP33032 325 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 IDH3GP51553 393 aaPredicted RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 SELENOTP62341 195 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 GNB2P62879 340 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 SRPXP78539 464 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 TDRG1Q3Y452 100 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ZNF66Q6ZN08 573 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 TEX43Q6ZNM6 134 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 Q6ZPA2 131 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 LYZL2Q7Z4W2 148 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 C11orf53Q8IXP5 236 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 Q8NA96 180 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ZNF596Q8TC21 504 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 MSI2Q96DH6 328 aaKnown RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 GNPNAT1Q96EK6 184 aaPredicted RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 TMEM56Q96MV1 263 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 IMMP2LQ96T52 175 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ZNF2Q9BSG1 426 aaPredicted RBP4.51□□□□□ -1.69
VPS41-203ENST00000395969 OR2J1Q9GZK6 312 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 NAA60Q9H7X0 242 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 ANXA10Q9UJ72 324 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 POLR1DQ9Y2S0 133 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 POLDIP2Q9Y2S7 368 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 TMEM56-RWDD3S4R434 201 aa4.51□□□□□ -1.69
VPS41-203ENST00000395969 FREM2Q5SZK8 3169 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 IGKV1D-8A0A087WSZ0 117 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 A0A1W2PP11 408 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 FAM90A9PA6NNJ1 464 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 CD300LBA8K4G0 201 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 NHLH1Q02575 133 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 PLP2Q04941 152 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 ARFRP1Q13795 201 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 PRSS8Q16651 343 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 ACOT6Q3I5F7 207 aaPredicted RBP4.5□□□□□ -1.69
VPS41-203ENST00000395969 CHRFAM7AQ494W8 412 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms