RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ERVK-16P61578 105 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 ABLIM2Q6H8Q1 611 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 STPG3Q8N7X2 389 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 MSI2Q96DH6 328 aaKnown RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 CCNL2Q96S94 520 aaPredicted RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 SDF2L1Q9HCN8 221 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 ZNF331Q9NQX6 463 aaPredicted RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 IGKV1-27A0A075B6S5 117 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 A0A0J9YW62 118 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 HSBP1L1C9JCN9 74 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 PGLYRP1O75594 196 aaPredicted RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 GZMHP20718 246 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 AESQ08117 197 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 OR2D3Q8NGH3 330 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 SPSB1Q96BD6 273 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 ABI3Q9P2A4 366 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 KIAA1549Q9HCM3 1950 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 GATA2P23769 480 aaPredicted RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 COL8A2P25067 703 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 IL3RAP26951 378 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 GPR6P46095 362 aaPredicted RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 SSR4P51571 173 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 UCP2P55851 309 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 RBM11P57052 281 aaKnown RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 NXPH1P58417 271 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 PSG4Q00888 419 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 RELBQ01201 579 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 PMCHL1Q16048 86 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 ZNF506Q5JVG8 444 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 ANKRD37Q7Z713 158 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 LHFPL1Q86WI0 220 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 H1FOOQ8IZA3 346 aaPredicted RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 OR5B3Q8NH48 314 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 BLNKQ8WV28 456 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 TAF15Q92804 592 aaKnown RBP eCLIP7.53□□□□□ -1.2
RTN4-206ENST00000394611 MOB3AQ96BX8 217 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 FAM122AQ96E09 287 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 OR2J1Q9GZK6 312 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 MRPL18Q9H0U6 180 aaKnown RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 YLPM1P49750 1951 aaKnown RBP7.53□□□□□ -1.2
RTN4-206ENST00000394611 IGHV1OR21-1A0A087WYE8 117 aa7.52□□□□□ -1.2
RTN4-206ENST00000394611 GABRA6Q16445 453 aa7.52□□□□□ -1.2
RTN4-206ENST00000394611 RAB37Q96AX2 223 aa7.52□□□□□ -1.2
RTN4-206ENST00000394611 B3GAT1Q9P2W7 334 aa7.52□□□□□ -1.2
RTN4-206ENST00000394611 ATP23Q9Y6H3 246 aa7.52□□□□□ -1.2
RTN4-206ENST00000394611 C17orf112F2Z3M2 114 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 RHBDL1O75783 438 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 HOXC4P09017 264 aaPredicted RBP7.52□□□□□ -1.21
RTN4-206ENST00000394611 SRIP30626 198 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 ADMP35318 185 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 UBE2NP61088 152 aaKnown RBP7.52□□□□□ -1.21
RTN4-206ENST00000394611 QRFPP83859 136 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 ARL16Q0P5N6 197 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 COL5A1-AS1Q5SY13 56 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 OR52L2PQ8NGH6 319 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 OR6X1Q8NH79 312 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 RAB40CQ96S21 281 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 DEFB127Q9H1M4 99 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 OR6C3Q9NZP0 311 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 LRP4O75096 1905 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 A6NCN8 305 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 CBR3O75828 277 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 CSRP1P21291 193 aaKnown RBP7.52□□□□□ -1.21
RTN4-206ENST00000394611 HLA-DRB5Q30154 266 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 TM4SF20Q53R12 229 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 CARFQ8N187 725 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 OR10D3Q8NH80 312 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 FGFBP3Q8TAT2 258 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 PARD6GQ9BYG4 376 aaPredicted RBP7.52□□□□□ -1.21
RTN4-206ENST00000394611 LSM4Q9Y4Z0 139 aaKnown RBP7.52□□□□□ -1.21
RTN4-206ENST00000394611 M0R1X1 148 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 CATR1Q13166 79 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 PSG5Q15238 335 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 TIGITQ495A1 244 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 C10orf91Q5T1B1 145 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 SPINK14Q6IE38 97 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 DTX1Q86Y01 620 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 OR2V1Q8NHB1 315 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 WDR61Q9GZS3 305 aaKnown RBP7.52□□□□□ -1.21
RTN4-206ENST00000394611 DCAF16Q9NXF7 216 aa7.52□□□□□ -1.21
RTN4-206ENST00000394611 SCO2A0A1W2PP80 73 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 DLEU1O43261 78 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 IGKV3-11P04433 115 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 FCER1GP30273 86 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 RIPPLY3P57055 190 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 Q6ZRM9 215 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 SSX8Q7RTT4 187 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 ABHD12Q8N2K0 398 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 POC1BQ8TC44 478 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 HSD17B10Q99714 261 aaKnown RBP7.51□□□□□ -1.21
RTN4-206ENST00000394611 HIPK2Q9H2X6 1198 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 F2Z2F3 143 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 M0R2Z0 102 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 NUPR1O60356 82 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 GCGP01275 180 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 ARL14EPLP0DKL9 152 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 ZNF841Q6ZN19 808 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 FGFRL1Q8N441 504 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 TANC2Q9HCD6 1990 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms