RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZNF66Q6ZN08 573 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 CMTM1Q8IZ96 169 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 OR8H1Q8NGG4 311 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 OR5AN1Q8NGI8 311 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 TERB2Q8NHR7 220 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 DEDD2Q8WXF8 326 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 RNF5Q99942 180 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 SLC25A33Q9BSK2 321 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 NPFFR1Q9GZQ6 430 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 PRELID3BQ9Y3B1 194 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 WASHC3Q9Y3C0 194 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 MXRA5Q9NR99 2828 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 NCBP2LA6PVI3 153 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 RNF212BA8MTL3 300 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 H0YJW9 148 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 DUTP33316 252 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 UCP3P55916 312 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 RTL8BQ17RB0 113 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 SCGB2B2Q4G0G5 96 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 ZNF57Q68EA5 555 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 GLDNQ6ZMI3 551 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 MFSD4AQ8N468 514 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 ZNF383Q8NA42 475 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 ZFAND1Q8TCF1 268 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 FLYWCH2Q96CP2 140 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 PRSS22Q9GZN4 317 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 SLC35D1Q9NTN3 355 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 SCP2D1Q9UJQ7 156 aa9.53□□□□□ -0.88
SPTLC1-202ENST00000337841 GPR31O00270 319 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 HKR1P10072 659 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 PGAM2P15259 253 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 GNRHRP30968 328 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 ECI1P42126 302 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 LINC00205P59089 165 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 RPS16P62249 146 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 FOXL1Q12952 345 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 CATR1Q13166 79 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 ZNF846Q147U1 533 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 KRTAP24-1Q3LI83 254 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 PDPNQ86YL7 162 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 SLC38A6Q8IZM9 456 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 BVESQ8NE79 360 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 OR4D10Q8NGI6 311 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 OR4C16Q8NGL9 310 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 OR4C13Q8NGP0 309 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 OR4F5Q8NH21 305 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 SCGB3A2Q96PL1 93 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 PRRT1Q99946 306 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 AKIP1Q9NQ31 210 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 MCUBQ9NWR8 336 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 MOB4Q9Y3A3 225 aa9.52□□□□□ -0.89
SPTLC1-202ENST00000337841 FGF16O43320 207 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 CHST1O43916 411 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 PGLYRP1O75594 196 aaPredicted RBP9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 TSPAN9O75954 239 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 NDUFA7O95182 113 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 IGLV2-14P01704 120 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 ZNF735P0CB33 412 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 KIR2DS2P43631 304 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 LGALS7P47929 136 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 PPP5CP53041 499 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 KLF9Q13886 244 aaPredicted RBP9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 BAK1Q16611 211 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 ABCA11PQ4W5N1 156 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 AADACL3Q5VUY0 350 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 ZNF818PQ6ZRF7 136 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 KCTD9Q7L273 389 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 LHFPL1Q86WI0 220 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 Q8N6K4 173 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 POC5Q8NA72 575 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 TCTEX1D2Q8WW35 142 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 TRIM63Q969Q1 353 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 C5orf30Q96GV9 206 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 TSNAXQ99598 290 aaKnown RBP9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 RASL11BQ9BPW5 248 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 RSRP1Q9BUV0 290 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 C19orf24Q9BVV8 132 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 WDR12Q9GZL7 423 aaKnown RBP9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 RANBP3Q9H6Z4 567 aaPredicted RBP9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 BEX1Q9HBH7 125 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 HRASLSQ9HDD0 168 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 KIAA1456Q9P272 454 aa9.51□□□□□ -0.89
SPTLC1-202ENST00000337841 A0A1B0GUS0 222 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 TMEM89A2RUT3 159 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 NAP1L6A6NFF2 107 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 LINC00473A8K010 186 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 CENPXA8MT69 81 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 TNFSF12O43508 249 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 FCGR3BO75015 233 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 CD40LGP29965 261 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 RAG2P55895 527 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 BLCAPP62952 87 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 MMDQ15546 238 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 KRTAP21-3Q3LHN1 58 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 ARSJQ5FYB0 599 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 FAAP20Q6NZ36 180 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 C11orf88Q6PI97 169 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 OR51S1Q8NGJ8 323 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 CD300LFQ8TDQ1 290 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms