RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 C12orf77C9JDV5 145 aa16■□□□□ 0.15
RTN4-201ENST00000317610 C17orf112F2Z3M2 114 aa16■□□□□ 0.15
RTN4-201ENST00000317610 CDIPTO14735 213 aa16■□□□□ 0.15
RTN4-201ENST00000317610 WISP2O76076 250 aa16■□□□□ 0.15
RTN4-201ENST00000317610 HAND1O96004 215 aa16■□□□□ 0.15
RTN4-201ENST00000317610 TDGF1P13385 188 aa16■□□□□ 0.15
RTN4-201ENST00000317610 OR3A1P47881 315 aa16■□□□□ 0.15
RTN4-201ENST00000317610 OR1C1Q15619 314 aa16■□□□□ 0.15
RTN4-201ENST00000317610 ZDHHC16Q969W1 377 aa16■□□□□ 0.15
RTN4-201ENST00000317610 C1QTNF9BB2RNN3 333 aa16■□□□□ 0.15
RTN4-201ENST00000317610 C11orf94C9JXX5 98 aa16■□□□□ 0.15
RTN4-201ENST00000317610 PSPNO60542 156 aa16■□□□□ 0.15
RTN4-201ENST00000317610 PMP22Q01453 160 aa16■□□□□ 0.15
RTN4-201ENST00000317610 TBC1D28Q2M2D7 210 aa16■□□□□ 0.15
RTN4-201ENST00000317610 WDYHV1Q96HA8 205 aa16■□□□□ 0.15
RTN4-201ENST00000317610 R4GN57 208 aa16■□□□□ 0.15
RTN4-201ENST00000317610 SMPD2O60906 423 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 CDC34P49427 236 aaPredicted RBP15.99■□□□□ 0.15
RTN4-201ENST00000317610 RPL15P61313 204 aaKnown RBP15.99■□□□□ 0.15
RTN4-201ENST00000317610 SSX2Q16385 188 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 GABRA6Q16445 453 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 SLC35E4Q6ICL7 350 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 TMEM144Q7Z5S9 345 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 LINC01551Q86U37 167 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 IMMP2LQ96T52 175 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 SPRY4Q9C004 299 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 OOEPA6NGQ2 149 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 PDE6DO43924 150 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 C3AR1Q16581 482 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 FBXW9Q5XUX1 488 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 ZNF808Q8N4W9 903 aaPredicted RBP15.99■□□□□ 0.15
RTN4-201ENST00000317610 GBGT1Q8N5D6 347 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 OR52L2PQ8NGH6 319 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 RAB1CQ92928 201 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 BTF3L4Q96K17 158 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 ZPBPQ9BS86 351 aa15.99■□□□□ 0.15
RTN4-201ENST00000317610 ZNF705GA8MUZ8 300 aaPredicted RBP15.98■□□□□ 0.15
RTN4-201ENST00000317610 SELLP14151 372 aa15.98■□□□□ 0.15
RTN4-201ENST00000317610 IL3RAP26951 378 aa15.98■□□□□ 0.15
RTN4-201ENST00000317610 CNN1P51911 297 aaKnown RBP15.98■□□□□ 0.15
RTN4-201ENST00000317610 PPP1CBP62140 327 aa15.98■□□□□ 0.15
RTN4-201ENST00000317610 SLC10A1Q14973 349 aa15.98■□□□□ 0.15
RTN4-201ENST00000317610 TAAR6Q96RI8 345 aa15.98■□□□□ 0.15
RTN4-201ENST00000317610 DDA1Q9BW61 102 aa15.98■□□□□ 0.15
RTN4-201ENST00000317610 C12orf49Q9H741 205 aa15.98■□□□□ 0.15
RTN4-201ENST00000317610 TMEM210A6NLX4 147 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 HBZP02008 142 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 GNB1P62873 340 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 PRSS8Q16651 343 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 FAM53AQ6NSI3 398 aaPredicted RBP15.97■□□□□ 0.15
RTN4-201ENST00000317610 H2BFWTQ7Z2G1 175 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 HLA-CQ95604 372 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 OR2J1Q9GZK6 312 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 ABI3Q9P2A4 366 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 WDR83OSQ9Y284 106 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 DIDO1Q9BTC0 2240 aaKnown RBP15.97■□□□□ 0.15
RTN4-201ENST00000317610 SNRPCP09234 159 aaKnown RBP15.97■□□□□ 0.15
RTN4-201ENST00000317610 ACP1P24666 158 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 CEBPDP49716 269 aaPredicted RBP15.97■□□□□ 0.15
RTN4-201ENST00000317610 FIP1L1Q6UN15 594 aaKnown RBP15.97■□□□□ 0.15
RTN4-201ENST00000317610 DOCK7Q96N67 2140 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 USF3Q68DE3 2245 aa15.97■□□□□ 0.15
RTN4-201ENST00000317610 C15orf62A8K5M9 175 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 IQCF6A8MYZ5 107 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 SOX15O60248 233 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 CHRNA7P36544 502 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 MPLP40238 635 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 PLGLB1Q02325 96 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 IQCJQ1A5X6 159 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 FAM78BQ5VT40 261 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 WDR31Q8NA23 367 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 KCNIP2Q9NS61 270 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 DEFA4P12838 97 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 RPS16P62249 146 aaKnown RBP15.96■□□□□ 0.15
RTN4-201ENST00000317610 FOXL1Q12952 345 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 ALKBH6Q3KRA9 238 aa15.96■□□□□ 0.15
RTN4-201ENST00000317610 DNAJC13O75165 2243 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 F6UZH7 168 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 CELA3BP08861 270 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 AARDQ4LEZ3 155 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 MRPL41Q8IXM3 137 aaKnown RBP15.95■□□□□ 0.14
RTN4-201ENST00000317610 PLA2G3Q9NZ20 509 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 PXMP4Q9Y6I8 212 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 DOCK11Q5JSL3 2073 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 GTF3C1Q12789 2109 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 FOSL1P15407 271 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 SPCS3P61009 180 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 MRPL49Q13405 166 aaKnown RBP15.95■□□□□ 0.14
RTN4-201ENST00000317610 BTNL3Q6UXE8 466 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 COQ2Q96H96 371 aa15.95■□□□□ 0.14
RTN4-201ENST00000317610 GALR2O43603 387 aaPredicted RBP15.94■□□□□ 0.14
RTN4-201ENST00000317610 GRPP07492 148 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 CD82P27701 267 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 ATP5G3P48201 142 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 RAB4BP61018 213 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 PAX5Q02548 391 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 NINJ1Q92982 152 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 LINC00473A8K010 186 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 ZNF891A8MT65 544 aaPredicted RBP15.94■□□□□ 0.14
RTN4-201ENST00000317610 PDGFBP01127 241 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms