RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 NRTNQ99748 197 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 C19orf24Q9BVV8 132 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 TRAPPC2LQ9UL33 140 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 UFC1Q9Y3C8 167 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 TRBV6-6A0A0A6YYG2 114 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 A0A1W2PS18 150 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 A4D1N5 150 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 METTL12A8MUP2 240 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 MS4A18H0YCH9 400 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 J3QR89 54 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF737O75373 536 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF324O75467 553 aaPredicted RBP5.64□□□□□ -1.51
ZNF540-201ENST00000316433 ADH4P08319 380 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 DYNLT3P51808 116 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 MEF2CQ06413 473 aaPredicted RBP5.64□□□□□ -1.51
ZNF540-201ENST00000316433 ACKR1Q16570 336 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 MS4A18Q3C1V0 323 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 BRICD5Q6PL45 260 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 WDR74Q6RFH5 385 aaPredicted RBP5.64□□□□□ -1.51
ZNF540-201ENST00000316433 SULF2Q8IWU5 870 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 FADS6Q8N9I5 356 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM54Q969K7 222 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 ST6GALNAC6Q969X2 333 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 PERPQ96FX8 193 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 KLHDC7BQ96G42 594 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 SLC25A44Q96H78 314 aaPredicted RBP5.64□□□□□ -1.51
ZNF540-201ENST00000316433 GPR82Q96P67 336 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 DEFB118Q96PH6 123 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 JMJD8Q96S16 334 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 DUSP23Q9BVJ7 150 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 CLEC7AQ9BXN2 247 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 GNB4Q9HAV0 340 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 TAAR3PQ9P1P4 343 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 ERG28Q9UKR5 140 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 TMED7-TICAM2A0A0A6YYA0 188 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF878C9JN71 531 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 SRFP11831 508 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 GPR12P47775 334 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF726P1Q15940 193 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 HLA-DRB5Q30154 266 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 PLAC9Q5JTB6 97 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM42Q69YG0 159 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 H1FNTQ75WM6 255 aaPredicted RBP5.64□□□□□ -1.51
ZNF540-201ENST00000316433 SGMS2Q8NHU3 365 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 RAX2Q96IS3 184 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 AMELYQ99218 206 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 PKIBQ9C010 78 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 RPRMQ9NS64 109 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 CD207Q9UJ71 328 aa5.64□□□□□ -1.51
ZNF540-201ENST00000316433 TNRC6AQ8NDV7 1962 aaKnown RBP5.64□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM265A0A087WTH1 108 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 PRR33A8MZF0 331 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 SLC33A1O00400 549 aaPredicted RBP5.63□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF20P17024 532 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 SLC25A34Q6PIV7 304 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 FOXI2Q6ZQN5 318 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 LYZL2Q7Z4W2 148 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 MRPL30Q8TCC3 161 aaKnown RBP5.63□□□□□ -1.51
ZNF540-201ENST00000316433 DAZLQ92904 295 aaKnown RBP5.63□□□□□ -1.51
ZNF540-201ENST00000316433 C18orf12Q96KH6 178 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 MTCH1Q9NZJ7 389 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 hCG_38984A0A1B0GV85 526 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 LIPT2A6NK58 231 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 MLNRO43193 412 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 IGHV4-34P06331 123 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 CTLA4P16410 223 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 DNASE1L1P49184 302 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 Q6ZSR6 202 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 PRSS41Q7RTY9 318 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 TUSC5Q8IXB3 177 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 SLC22A18ASQ8N1D0 253 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM252Q8N6L7 170 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 NFAM1Q8NET5 270 aaPredicted RBP5.63□□□□□ -1.51
ZNF540-201ENST00000316433 OR52E5Q8NH55 327 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 SLC37A2Q8TED4 501 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 CT55Q8WUE5 264 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 RLN3Q8WXF3 142 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 SPSB4Q96A44 273 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 GMPPAQ96IJ6 420 aaPredicted RBP5.63□□□□□ -1.51
ZNF540-201ENST00000316433 SERTAD4Q9NUC0 356 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 KCNIP1Q9NZI2 227 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 KIAA2026Q5HYC2 2103 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 A0A0A6YYD4 124 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 NPIPB11E5RHQ5 1161 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 WISP2O76076 250 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 IL11P20809 199 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 CA7P43166 264 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 SEC11AP67812 179 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 TGFBR3Q03167 851 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF585BQ52M93 769 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 OR10J3Q5JRS4 329 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 FA2HQ7L5A8 372 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 LINC00596Q86U02 117 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 PIP4P2Q8N4L2 257 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 ULBP2Q9BZM5 246 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 BANF2Q9H503 90 aa5.63□□□□□ -1.51
ZNF540-201ENST00000316433 B5MCH6 92 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM150CB9EJG8 249 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 H3BUT2 72 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms