RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TPPP2P59282 170 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 ZNF90Q03938 601 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 KRTAP27-1Q3LI81 207 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 SPATA46Q5T0L3 261 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 CCDC74BQ96LY2 380 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 OR2J1Q9GZK6 312 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 F6UZH7 168 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 SPINK4O60575 86 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
COL6A2-202ENST00000310645 BRS3P32247 399 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 TGFBR3Q03167 851 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 FBXO46Q6PJ61 603 aaPredicted RBP12.38□□□□□ -0.43
COL6A2-202ENST00000310645 VASH2Q86V25 355 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 PRDM14Q9GZV8 571 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 PPP1R14DQ9NXH3 145 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 ELOVL5Q9NYP7 299 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 TIMM9Q9Y5J7 89 aa12.38□□□□□ -0.43
COL6A2-202ENST00000310645 IGHV5-10-1A0A0J9YXX1 117 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 F2Z2F3 143 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 SLC17A3O00476 420 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 CRISP2P16562 243 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 KRTDAPP60985 99 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 SFRP2Q96HF1 295 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 CA6P23280 308 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 LINC00205P59089 165 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 GGNQ86UU5 652 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 DTD1Q8TEA8 209 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 ODAMA1E959 279 aa12.37□□□□□ -0.43
COL6A2-202ENST00000310645 SIAH2O43255 324 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 TNFSF13O75888 250 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 SYNGR4O95473 234 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 TMEM183BQ1AE95 376 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 P04436 131 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 FRMD6-AS1P0C7T7 363 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 MSMO1Q15800 293 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 SAXO1Q8IYX7 474 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 PI4KAP42356 2102 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 ZNF503-AS2A6NEH8 195 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 ANKRD30BLA7E2S9 258 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 MLNRO43193 412 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 COL8A2P25067 703 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 B3GALT5-AS1P59052 145 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 TPTE2P1Q5T6R2 138 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 TMEM144Q7Z5S9 345 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 C11orf42Q8N5U0 333 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 OR5AU1Q8NGC0 362 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 TP53TG3Q9ULZ0 132 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 AHCTF1Q8WYP5 2266 aa12.36□□□□□ -0.43
COL6A2-202ENST00000310645 TRBV20OR9-2A0A075B6H5 130 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 IGHV1-45A0A0A0MS14 117 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 S1PR2O95136 353 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 WNT2P09544 360 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 RPL30P62888 115 aaKnown RBP12.35□□□□□ -0.43
COL6A2-202ENST00000310645 TRA2AQ13595 282 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL6A2-202ENST00000310645 MRPL14Q6P1L8 145 aaKnown RBP12.35□□□□□ -0.43
COL6A2-202ENST00000310645 BTF3L4Q96K17 158 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 OR2D2Q9H210 308 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 LRP5LA4QPB2 252 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 IER3P46695 156 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
COL6A2-202ENST00000310645 PRDM6Q9NQX0 595 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-202ENST00000310645 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
COL6A2-202ENST00000310645 TRAV34A0A0B4J273 112 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 FCN1O00602 326 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 GDF1P27539 372 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 CD82P27701 267 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 MMDQ15546 238 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 COLCA1Q6ZS62 124 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 OR10G8Q8NGN5 311 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-202ENST00000310645 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-202ENST00000310645 STRADBQ9C0K7 418 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 TUBG2Q9NRH3 451 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 MRPS18CQ9Y3D5 142 aaKnown RBP12.34□□□□□ -0.43
COL6A2-202ENST00000310645 SCO2A0A1W2PP80 73 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 LRRC30A6NM36 301 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 UMODP07911 640 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 COX6A1P12074 109 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 CEBPDP49716 269 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-202ENST00000310645 MRPS11P82912 194 aaKnown RBP12.34□□□□□ -0.43
COL6A2-202ENST00000310645 ATP6V1FQ16864 119 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 OCC1Q8TAD7 63 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 UBE2ZQ9H832 354 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-202ENST00000310645 HSPB7Q9UBY9 170 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 C17orf112F2Z3M2 114 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 PDE6DO43924 150 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 FOXL1Q12952 345 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 RIPPLY2Q5TAB7 128 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 DNAJC4Q9NNZ3 241 aa12.34□□□□□ -0.43
COL6A2-202ENST00000310645 KIAA1549Q9HCM3 1950 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 C17orf98A8MV24 154 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-202ENST00000310645 OR2H2O95918 312 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 SRD5A2P31213 254 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 GNG3P63215 75 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 KIAA1644Q3SXP7 199 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 CADM4Q8NFZ8 388 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms