RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 OR10G9Q8NGN4 311 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 RDH5Q92781 318 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 C11orf52Q96A22 123 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 GUCD1Q96NT3 240 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 TTTY12Q9BZ98 90 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 DSCAMO60469 2012 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 ASCC3Q8N3C0 2202 aaKnown RBP4.53□□□□□ -1.68
VPS50-202ENST00000305866 ZNF850A8MQ14 1090 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 DLEU1O43261 78 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 CEACAM4O75871 244 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 DFFBO76075 338 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 B4GALT1P15291 398 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 SELEP16581 610 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 FGF7P21781 194 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 ARF1P84077 181 aaKnown RBP4.53□□□□□ -1.68
VPS50-202ENST00000305866 C4orf17Q53FE4 359 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 UTF1Q5T230 341 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 MBNL2Q5VZF2 373 aaKnown RBP4.53□□□□□ -1.68
VPS50-202ENST00000305866 FNDC10F2Z333 226 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 ZNHIT1O43257 154 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 IGKV3-15P01624 115 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 HBE1P02100 147 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 CD59P13987 128 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 ZNF16P17020 682 aaPredicted RBP4.52□□□□□ -1.69
VPS50-202ENST00000305866 OMGP23515 440 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 GNG3P63215 75 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 TLE4Q04727 773 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 ZNF787Q6DD87 383 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 OR4F17Q8NGA8 305 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 OR52E5Q8NH55 327 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 OR4F4Q96R69 305 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 DLL3Q9NYJ7 618 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 GNG13Q9P2W3 67 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 SPAG17Q6Q759 2223 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 FAM230AA0A1W2PPH8 454 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 TCAPO15273 167 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 TNFSF13O75888 250 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 TNFSF15O95150 251 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 IRF2P14316 349 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 RAC2P15153 192 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 ADMP35318 185 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 ATP6V1FQ16864 119 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 TMEM241Q24JQ0 296 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 HLA-DRB5Q30154 266 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 PLCXD3Q63HM9 321 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 MAFAQ8NHW3 353 aaPredicted RBP4.52□□□□□ -1.69
VPS50-202ENST00000305866 ALKBH3Q96Q83 286 aaPredicted RBP4.52□□□□□ -1.69
VPS50-202ENST00000305866 SFXN3Q9BWM7 321 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 OR51B6Q9H340 312 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 LPAR2Q9HBW0 351 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 OBP2BQ9NPH6 170 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 WASF3Q9UPY6 502 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 LOXL2Q9Y4K0 774 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 CD300LBA8K4G0 201 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 AHRRA9YTQ3 701 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 SYNGR2O43760 224 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 RHBDL1O75783 438 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 TOMM40O96008 361 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 CGB3P0DN86 165 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 CGB7P0DN87 165 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 VDAC2P45880 294 aaPredicted RBP4.52□□□□□ -1.69
VPS50-202ENST00000305866 HTD2P86397 168 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 Q0VG73 95 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 WIPI1Q5MNZ9 446 aaPredicted RBP4.52□□□□□ -1.69
VPS50-202ENST00000305866 MEX3BQ6ZN04 569 aaKnown RBP4.52□□□□□ -1.69
VPS50-202ENST00000305866 FAM214BQ7L5A3 538 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 NIT1Q86X76 327 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 C1orf210Q8IVY1 113 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 OR56B2PQ8NGI1 322 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 ABHD3Q8WU67 409 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 DDB2Q92466 427 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 MBD6Q96DN6 1003 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 LURAP1Q96LR2 239 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 ELL3Q9HB65 397 aaPredicted RBP4.52□□□□□ -1.69
VPS50-202ENST00000305866 V9GYV3 84 aa4.52□□□□□ -1.69
VPS50-202ENST00000305866 USF3Q68DE3 2245 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 LOC105371242A0A075B767 164 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 XKRY2A2RUG3 117 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 A6NNC1 897 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 C15orf65H3BRN8 121 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 ZNF737O75373 536 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 OR10J4P0C629 311 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 LGALS4P56470 323 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 ERVS71-1P61550 626 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 RAB11AP62491 216 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 ARG2P78540 354 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 HOXA4Q00056 320 aaPredicted RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 GNMTQ14749 295 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 ABCA11PQ4W5N1 156 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 PIP4P1Q86T03 277 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 DRAM1Q8N682 238 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 TMEM251Q8N6I4 163 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 TMEM217Q8N7C4 229 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 OR10V1Q8NGI7 309 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 GMPPAQ96IJ6 420 aaPredicted RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 IGF2BP2-AS1Q96M15 143 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 PATZ1Q9HBE1 687 aaKnown RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 KCNIP1Q9NZI2 227 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 B4GALT7Q9UBV7 327 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms