RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 THNSL2Q86YJ6 484 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 VKORC1Q9BQB6 163 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 KPTNQ9Y664 436 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 RP1L1Q8IWN7 2480 aaPredicted RBP10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 KBTBD11-OT1A0A1B0GTJ5 212 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 BTBD17A6NE02 478 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 MARCH11A6NNE9 402 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 FAM157AC9JC47 383 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 C9JQL5 133 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 M0R1X1 148 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 ITGB1BP1O14713 200 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 GYPAP02724 150 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 C17orf58Q2M2W7 97 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 NCR3LG1Q68D85 454 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 ZNF788Q6ZQV5 615 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 ZNF525Q8N782 197 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 CCL13Q99616 98 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 CLN8Q9UBY8 286 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 A0A1B0GW64 132 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 NKX6-3A6NJ46 265 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 FCGR3BO75015 233 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 RBMXL2O75526 392 aaKnown RBP10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 HPRT1P00492 218 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 H2AFB1P0C5Y9 115 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 ATF4P18848 351 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 PPT1P50897 306 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 CASP6P55212 293 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 LINC00205P59089 165 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 TLE4Q04727 773 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 ARL16Q0P5N6 197 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 ADAM5Q6NVV9 412 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 HAPLN4Q86UW8 402 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 R3HDM4Q96D70 268 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 WFIKKN1Q96NZ8 548 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 CIB3Q96Q77 187 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 ABHD14AQ9BUJ0 271 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 SCRT1Q9BWW7 348 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 PARD6GQ9BYG4 376 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 EGLN1Q9GZT9 426 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 IFI27L2Q9H2X8 130 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 GFOD1Q9NXC2 390 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 GAB2Q9UQC2 676 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 PRELID3BQ9Y3B1 194 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 FBXO7Q9Y3I1 522 aa10.71□□□□□ -0.69
SPTLC1-201ENST00000262554 SPTBN2O15020 2390 aa10.71□□□□□ -0.7
SPTLC1-201ENST00000262554 PLCE1Q9P212 2302 aa10.71□□□□□ -0.7
SPTLC1-201ENST00000262554 ICE1Q9Y2F5 2266 aa10.71□□□□□ -0.7
SPTLC1-201ENST00000262554 A0A1B0GV50 99 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 LOC105371267A0A1B0GV96 52 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 ZNF729A6NN14 1252 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 PROP1O75360 226 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 OR8U8P0C7N1 319 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 KIR2DS2P43631 304 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 ZNF134P52741 427 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 RAB2AP61019 212 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 LRRC75BQ2VPJ9 315 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 RPL39P5Q59GN2 51 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 DUX4L9Q6RFH8 374 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 TMEM14EPQ6UXP3 125 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 FAM216BQ8N7L0 139 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 DTD1Q8TEA8 209 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 PSMG3Q9BT73 122 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 TRAV38-1A0A0B4J264 116 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 TRGV8A0A0C4DH27 118 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 FAM90A9PA6NNJ1 464 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 RBFOX2O43251 390 aaKnown RBP eCLIP10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 IGHV3-7P01780 117 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 NPBWR1P48145 328 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 ERVK-16P61578 105 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 TLE1Q04724 770 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 SLC38A11Q08AI6 406 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 TMEM30BQ3MIR4 351 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 OR8G2PQ6IF36 304 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 TGIF2LYQ8IUE0 185 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 C1orf87Q8N0U7 546 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 S1PR3Q99500 378 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 SMDT1Q9H4I9 107 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 SAP30LQ9HAJ7 183 aa10.7□□□□□ -0.7
SPTLC1-201ENST00000262554 CEBPZOSA8MTT3 80 aa10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 PPIHO43447 177 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 HBE1P02100 147 aa10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 CLRN3Q8NCR9 226 aa10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 CORO2AQ92828 525 aa10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 RSG1Q9BU20 258 aa10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 IDI2-AS1Q9NZ38 188 aa10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 RAXQ9Y2V3 346 aa10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 HCFC1P51610 2035 aa10.69□□□□□ -0.7
SPTLC1-201ENST00000262554 TMPRSS2O15393 492 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 SLC31A2O15432 143 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 ZG16O60844 167 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 NDUFB7P17568 137 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 NFYBP25208 207 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 SERF2P84101 59 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 ATP6V1FQ16864 119 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 CT45A1Q5HYN5 189 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 DHRS7BQ6IAN0 325 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 TMEM88Q6PEY1 159 aa10.68□□□□□ -0.7
SPTLC1-201ENST00000262554 SPSB3Q6PJ21 355 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms