RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 CA11O75493 328 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 TSPAN15O95858 294 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 CD55P08174 381 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 GSTP1P09211 210 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 CNTFRP26992 372 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 TCTEX1D4Q5JR98 221 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 Q8N6K4 173 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 NHLRC2Q8NBF2 726 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 OR1M1Q8NGA1 313 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 OR51S1Q8NGJ8 323 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF503Q96F45 646 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 TBX15Q96SF7 602 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF107Q9UII5 783 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 RNF213Q63HN8 5207 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 C5orf49A4QMS7 147 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 SLC22A20A6NK97 555 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 SGCEO43556 437 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 MT-ND4P03905 459 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 CRHP06850 196 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 FCGR3AP08637 254 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 COX5BP10606 129 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 FUT6P51993 359 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 BTG1P62324 171 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 ADAM5Q6NVV9 412 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 OR1S2Q8NGQ3 325 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB1CQ92928 201 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF486Q96H40 463 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 PPA2Q9H2U2 334 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 TMEM165Q9HC07 324 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 NXPH2O95156 264 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 AADACP22760 399 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 BRS3P32247 399 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 RGS7BPQ6MZT1 257 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 VSTM2AQ8TAG5 236 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM3DQ96BQ1 224 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 BEX2Q9BXY8 128 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 PECRQ9BY49 303 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 RCL1Q9Y2P8 373 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 YTHDF2Q9Y5A9 579 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 IGKV1D-37A0A075B6S9 117 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 ADARB2-AS1A8MUL3 147 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 SNAPINO95295 136 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF44P15621 663 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 GLIPR1P48060 266 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 RBM11P57052 281 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 OR8H3Q8N146 312 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF808Q8N4W9 903 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 CMTM2Q8TAZ6 248 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 PTX4Q96A99 478 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 MRPS24Q96EL2 167 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 MED30Q96HR3 178 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 GON7Q9BXV9 100 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 RAB18Q9NP72 206 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 PPP1R2P9O14990 202 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 DEGS1O15121 323 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 NDUFB3O43676 98 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 GOSR1O95249 250 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF728P0DKX0 622 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 RAB6AP20340 208 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 RBP2P50120 134 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 BAMBIQ13145 260 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF726P1Q15940 193 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 CCDC144NLQ6NUI1 221 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 SLC22A25Q6T423 547 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM108Q6UXF1 575 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 TMED4Q7Z7H5 227 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 ZBTB34Q8NCN2 500 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 NPRL2Q8WTW4 380 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 REEP6Q96HR9 211 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM56Q96MV1 263 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 RANGRFQ9HD47 186 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 NLKQ9UBE8 527 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM96BQ9Y3D0 163 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 ATP23Q9Y6H3 246 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 A0A087X0M5 115 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 A0A1B0GUH1 482 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 A0A1B0GX30 115 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 CDIPTO14735 213 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 GABRR1P24046 479 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 DNASE1P24855 282 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 KLF3P57682 345 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 PCGF3Q3KNV8 242 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 C3orf36Q3SXR2 165 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 GFRALQ6UXV0 394 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 Q6ZQT7 251 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM216BQ8N7L0 139 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 TCTEX1D1Q8N7M0 179 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 OR51F2Q8NH61 342 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 DPF1Q92782 380 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 RAB3CQ96E17 227 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 GPR61Q9BZJ8 451 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 PLEKHA2Q9HB19 425 aa4.52□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF816-ZNF321PA0A0X1KG74 233 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 CBR1P16152 277 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 LUMP51884 338 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 ZDHHC16Q969W1 377 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 CABLES2Q9BTV7 478 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 ABHD14AQ9BUJ0 271 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 GSKIPQ9P0R6 139 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 GNG12Q9UBI6 72 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms