RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 RPS10-NUDT3A0A1W2PQS6 291 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 MARCH11A6NNE9 402 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 RRASP10301 218 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 HBG1P69891 147 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 HBG2P69892 147 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 AANATQ16613 207 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 AKR1C8PQ5T2L2 129 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 CCDC28AQ8IWP9 274 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 EIF5A2Q9GZV4 153 aaKnown RBP7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 FBXO7Q9Y3I1 522 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 SPENQ96T58 3664 aaKnown RBP7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 ABCA1O95477 2261 aa7.22□□□□□ -1.25
CALCOCO2-201ENST00000258947 LRRK2Q5S007 2527 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 A0A1W2PRD5 423 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 A0A1W2PRF3 423 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 A0A1W2PRM7 423 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 LINC00473A8K010 186 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 RAB29O14966 203 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 SHOXO15266 292 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 LHBP01229 141 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 IFNA4P05014 189 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 HTD2P86397 168 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 THNSL2Q86YJ6 484 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 CD300LFQ8TDQ1 290 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 PHYHIPLQ96FC7 376 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 SDSLQ96GA7 329 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 RAB40CQ96S21 281 aa7.21□□□□□ -1.25
CALCOCO2-201ENST00000258947 ARFGEF3Q5TH69 2177 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 NPIPB11E5RHQ5 1161 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 C1QL1O75973 258 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 COL8A2P25067 703 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 NMSQ5H8A3 153 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 Q6ZRM9 215 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 OR4D5Q8NGN0 318 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 RAB1CQ92928 201 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 IL22RA2Q969J5 263 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 PRORYQ9H606 182 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 KALRNO60229 2985 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 IGSF23A1L1A6 192 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 LINC00862A6NCI5 91 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 ZNF729A6NN14 1252 aaPredicted RBP7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 SCO1O75880 301 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 IGKV1-5P01602 117 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 APOA2P02652 100 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 UBE2KP61086 200 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 RUNX1Q01196 453 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 RTL8BQ17RB0 113 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 C1QTNF12Q5T7M4 302 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 ZNF66Q6ZN08 573 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 MMP24Q9Y5R2 645 aa7.21□□□□□ -1.26
CALCOCO2-201ENST00000258947 ZNF462Q96JM2 2506 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 SAA2-SAA4A0A096LPE2 208 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 MMP23AO75900 390 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 F12P00748 615 aaPredicted RBP7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 SAA2P0DJI9 122 aaPredicted RBP7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 ELLP55199 621 aaPredicted RBP7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 ZNF672Q499Z4 452 aaPredicted RBP7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 ZNF585BQ52M93 769 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 PXDC1Q5TGL8 231 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 OR4S2Q8NH73 311 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 RHOVQ96L33 236 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 SLC35D1Q9NTN3 355 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 DSCAMO60469 2012 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.2□□□□□ -1.267e-11■■■■■ 57.7
CALCOCO2-201ENST00000258947 IGHV3-72A0A0B4J1Y9 119 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 UBE2L5PA0A1B0GUS4 154 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 C15orf65H3BRN8 121 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 YPEL1O60688 119 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 ACTL6BO94805 426 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 STOML3Q8TAV4 291 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 DTD1Q8TEA8 209 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 YPEL2Q96QA6 119 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 SH3BGRL3Q9H299 93 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 LYRM2Q9NU23 88 aaPredicted RBP7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 STRAPQ9Y3F4 350 aaKnown RBP7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 GPR37O15354 613 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 IGKV1-39P01597 117 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 IGKV1D-39P04432 117 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 NQO2P16083 231 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 ZNF134P52741 427 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 DLX1P56177 255 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 BAXQ07812 192 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 CT45A1Q5HYN5 189 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 DMRTC2Q8IXT2 367 aaPredicted RBP7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 CT45A3Q8NHU0 189 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 Q8TCH9 128 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 ZDHHC16Q969W1 377 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 MARC2Q969Z3 335 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 HIPK2Q9H2X6 1198 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 LINC00312Q9Y6C7 94 aa7.2□□□□□ -1.26
CALCOCO2-201ENST00000258947 DFFBO76075 338 aa7.19□□□□□ -1.26
CALCOCO2-201ENST00000258947 DUTP33316 252 aaKnown RBP7.19□□□□□ -1.26
CALCOCO2-201ENST00000258947 OR8B3Q8NGG8 313 aa7.19□□□□□ -1.26
CALCOCO2-201ENST00000258947 LSM10Q969L4 123 aaKnown RBP7.19□□□□□ -1.26
CALCOCO2-201ENST00000258947 OR8B2Q96RD0 313 aa7.19□□□□□ -1.26
CALCOCO2-201ENST00000258947 TSNAXQ99598 290 aaKnown RBP7.19□□□□□ -1.26
CALCOCO2-201ENST00000258947 hCG_1809904A0A1W2PP81 198 aa7.19□□□□□ -1.26
CALCOCO2-201ENST00000258947 A0A1W2PPE2 198 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8419.9 ms