RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 RRASP10301 218 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 EPHA1P21709 976 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 EFNA4P52798 201 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 DLX6P56179 175 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 ODF3L1Q8IXM7 274 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 ARPC5LQ9BPX5 153 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 PLEKHA2Q9HB19 425 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 PITX3O75364 302 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 ID3Q02535 119 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 NCR3LG1Q68D85 454 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 RCL1Q9Y2P8 373 aaKnown RBP14.89□□□□□ -0.03
VIM-201ENST00000224237 PRELID3BQ9Y3B1 194 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 MMP24Q9Y5R2 645 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 S1PR2O95136 353 aa14.88□□□□□ -0.03
VIM-201ENST00000224237 HKR1P10072 659 aa14.88□□□□□ -0.03
VIM-201ENST00000224237 PVALBP20472 110 aaPredicted RBP14.88□□□□□ -0.03
VIM-201ENST00000224237 KIR2DS2P43631 304 aa14.88□□□□□ -0.03
VIM-201ENST00000224237 ERVFRD-1P60508 538 aa14.88□□□□□ -0.03
VIM-201ENST00000224237 UBA52P62987 128 aaKnown RBP14.88□□□□□ -0.03
VIM-201ENST00000224237 WDR25Q64LD2 544 aaPredicted RBP14.88□□□□□ -0.03
VIM-201ENST00000224237 S1PR3Q99500 378 aa14.88□□□□□ -0.03
VIM-201ENST00000224237 ZNF251Q9BRH9 671 aa14.88□□□□□ -0.03
VIM-201ENST00000224237 MED9Q9NWA0 146 aa14.88□□□□□ -0.03
VIM-201ENST00000224237 CACNG5Q9UF02 275 aa14.88□□□□□ -0.03
VIM-201ENST00000224237 A1L4Q6 167 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 OVOL3O00110 214 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 RBFOX2O43251 390 aaKnown RBP eCLIP14.87□□□□□ -0.03
VIM-201ENST00000224237 RPL12P30050 165 aaKnown RBP14.87□□□□□ -0.03
VIM-201ENST00000224237 GPR6P46095 362 aaPredicted RBP14.87□□□□□ -0.03
VIM-201ENST00000224237 P2RY1P47900 373 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 LINC00205P59089 165 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 CXorf66Q5JRM2 361 aaPredicted RBP14.87□□□□□ -0.03
VIM-201ENST00000224237 C8orf31Q8N9H6 132 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 DMBX1Q8NFW5 382 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 C8orf46Q8TAG6 207 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 ADTRPQ96IZ2 230 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 COA4Q9NYJ1 87 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 DOCK11Q5JSL3 2073 aa14.87□□□□□ -0.03
VIM-201ENST00000224237 A0A087X0M5 115 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 A0A1B0GX30 115 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 FCGR3BO75015 233 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 HPRT1P00492 218 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 KRASP01116 189 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 IGHV1-8P0DP01 117 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 THBS3P49746 956 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 POLR2GP62487 172 aaKnown RBP eCLIP14.86□□□□□ -0.03
VIM-201ENST00000224237 Q6ZRM9 215 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 ZNF471Q9BX82 626 aaPredicted RBP14.86□□□□□ -0.03
VIM-201ENST00000224237 PATZ1Q9HBE1 687 aaKnown RBP14.86□□□□□ -0.03
VIM-201ENST00000224237 ZC4H2Q9NQZ6 224 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 CRYBG3Q68DQ2 2970 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 F5H0A9 414 aaPredicted RBP14.86□□□□□ -0.03
VIM-201ENST00000224237 WRBO00258 174 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 SPDEFO95238 335 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 G6PCP35575 357 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 IZUMO4Q1ZYL8 232 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 ALKAL2Q6UX46 152 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 C1orf229Q6ZS94 237 aaPredicted RBP14.86□□□□□ -0.03
VIM-201ENST00000224237 COMMD7Q86VX2 200 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 ZNF596Q8TC21 504 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 DDB2Q92466 427 aa14.86□□□□□ -0.03
VIM-201ENST00000224237 TACC2O95359 2948 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 PPIAL4CA0A0B4J2A2 164 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 MARCH11A6NNE9 402 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 SSSCA1O60232 199 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 RBP4P02753 201 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 P0C879 139 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 PPIAL4GP0DN37 164 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 MMP9P14780 707 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 GNB2P62879 340 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 LINC00311Q8N616 119 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 ST8SIA2Q92186 375 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 C11orf1Q9H5F2 150 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 SESN1Q9Y6P5 492 aa14.85□□□□□ -0.03
VIM-201ENST00000224237 TAAR5O14804 337 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 NMBP08949 121 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 GPR157Q5UAW9 335 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 C11orf42Q8N5U0 333 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 OR4S2Q8NH73 311 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 MAGT1Q9H0U3 335 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 FAM90A26D6RGX4 464 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 J3QR06 171 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 TOR1AO14656 332 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 NXPH3O95157 252 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 VAMP2P63027 116 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 ZNF833PQ6ZTB9 187 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 H2BFWTQ7Z2G1 175 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 OR9G1Q8NH87 305 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 PCNPQ8WW12 178 aaKnown RBP14.84□□□□□ -0.03
VIM-201ENST00000224237 IGFBPL1Q8WX77 278 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 R3HDM4Q96D70 268 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 PHYHIPLQ96FC7 376 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 SSBP3Q9BWW4 388 aaPredicted RBP14.84□□□□□ -0.03
VIM-201ENST00000224237 TMEM133Q9H2Q1 129 aa14.84□□□□□ -0.03
VIM-201ENST00000224237 hCG_1809904A0A1W2PP81 198 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 A0A1W2PPE2 198 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 A0A1W2PR64 198 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 A0A1W2PRV1 198 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 KIAA1324LA8MWY0 1029 aaPredicted RBP14.83□□□□□ -0.04
VIM-201ENST00000224237 GPR137BO60478 399 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms