RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ddah2Q99LD8 285 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Pdzd11Q9CZG9 140 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mrpl13Q9D1P0 178 aaKnown RBP11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rtl8cQ9D6I0 112 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Wdr5bQ9D7H2 328 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Prss21Q9JHJ7 324 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ighv1-67A0A0G2JFN9 117 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr417F8VQB1 309 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Tlx3O55144 291 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ifna2P01573 190 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Itgb2P11835 771 aaKnown RBP11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 GlulP15105 373 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Rab5cP35278 216 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Cxcl12P40224 93 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Rab2aP53994 212 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Prrc1Q3UPH1 443 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Lrrc52Q5M8M9 314 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr506Q7TRU6 314 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Dtx2Q8R3P2 619 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr156Q8VGA9 318 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Dok5Q91ZM9 306 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Rpp14Q9CQH8 122 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 AspmQ8CJ27 3122 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm438B1ASB3 393 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Fut1O09160 376 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Pfdn2O70591 154 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hoxa5P09021 270 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Tcl1aP56280 116 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 FusP56959 518 aaKnown RBP11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 B3gat2P59270 324 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Trav5d-4Q5R1F6 114 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Usf2Q64705 346 aaKnown RBP11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Fbxo27Q6DIA9 280 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr1111Q7TR55 312 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr923Q7TRB9 317 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Cdadc1Q8BMD5 523 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Nmnat2Q8BNJ3 307 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr654Q8VF27 341 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr512Q8VFZ4 326 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Mrps30Q9D0G0 442 aaKnown RBP11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Q9DAF8 208 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Barx1Q9ER42 254 aa11.64□□□□□ -0.55
Nup88-201ENSMUST00000035283 Igkv12-89A0A0G2JGW8 112 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm37797A0A1D5RLC8 261 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 4930435E12RikA6X8Z9 381 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 A630073D07RikE9PWS6 100 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Rnase2bO35292 155 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hbb-bh0P04443 147 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Apoc1P34928 88 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 C1ql4Q4ZJM9 238 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Npy4rQ61041 375 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ceacam10Q61400 265 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 HaaoQ78JT3 286 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ceacam9Q78T27 234 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Q80W69 301 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 TecrlQ8BFZ1 361 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Mob3aQ8BSU7 217 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr1260Q8VGN9 310 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Sun5Q9DA32 373 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Wwtr1Q9EPK5 395 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 MioxQ9QXN5 285 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr159Q9QZ19 319 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ntn3Q9R1A3 580 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 DeddQ9Z1L3 318 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm10665K7N6B7 321 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Cd74P04441 279 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Klk1b5P15945 261 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Rab1AP62821 205 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hist1h3bP84228 136 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 H3f3aP84244 136 aaKnown RBP11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Eif4e1bQ3UTA9 244 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 PiglQ5SX19 252 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Nxph1Q61200 271 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 BtlaQ7TSA3 306 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Dirc2Q8BFQ6 478 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Znf574Q8BY46 900 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Plcxd1Q8CHS4 345 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Vmn1r66Q8K4I0 310 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Mbnl3Q8R003 342 aaKnown RBP11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Exosc2Q8VBV3 293 aaKnown RBP11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Utp23Q9CX11 249 aaKnown RBP11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Tmem128Q9CZB9 163 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Pfdn5Q9WU28 154 aa11.63□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm28285A0A087WQ54 102 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm5678A0A1B0GRG8 277 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Samt1A2BED8 237 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm15140A2BEE3 237 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm12790B1AUV6 201 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr204E9Q8M0 305 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm17669F6QL70 154 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hmgb3O54879 200 aaKnown RBP11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Prkar2aP12367 401 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Tpsb2P21845 276 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ube2kP61087 200 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 St6galnac2P70277 373 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Wdr34Q5U4F6 535 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Elavl2Q60899 360 aaKnown RBP11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Rasl2-9Q61820 216 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Zfp975Q6NVD6 525 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Scrt2Q8BTH6 311 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 2067 ms