RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 EDDM3BP56851 147 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 DAZAP2Q15038 168 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-227ENST00000640957 KIR2DL5AQ8N109 375 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 OCIAD1Q9NX40 245 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 ABCA1O95477 2261 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 PPP1CBP62140 327 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 SRYQ05066 204 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 ACOT6Q3I5F7 207 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-227ENST00000640957 VHLLQ6RSH7 139 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 OR8G5Q8NG78 346 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 MIEN1Q9BRT3 115 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 C20orf202A1L168 122 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 Q6ZN92 141 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 YRDCQ86U90 279 aaKnown RBP11.68□□□□□ -0.54
SCARB2-227ENST00000640957 ZNF441Q8N8Z8 693 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 NABP1Q96AH0 204 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 WDR61Q9GZS3 305 aaKnown RBP11.68□□□□□ -0.54
SCARB2-227ENST00000640957 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 A0A0U1RQV5 110 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 SYNGR1O43759 233 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 OR5G3P0C626 314 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 UCP1P25874 307 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 CNN3Q15417 329 aaKnown RBP11.67□□□□□ -0.54
SCARB2-227ENST00000640957 LCN12Q6JVE5 192 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 KCNIP4Q6PIL6 250 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 SAXO1Q8IYX7 474 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 PPP1R14DQ9NXH3 145 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 TPTE2P1Q5T6R2 138 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 OR1L1Q8NH94 360 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 PSMF1Q92530 271 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 ST6GALNAC6Q969X2 333 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 PYGO2Q9BRQ0 406 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 TWSG1Q9GZX9 223 aa11.67□□□□□ -0.54
SCARB2-227ENST00000640957 IGKV1-5P01602 117 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 IL6RP08887 468 aaPredicted RBP11.66□□□□□ -0.54
SCARB2-227ENST00000640957 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
SCARB2-227ENST00000640957 MBD3L1Q8WWY6 194 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 GPR35Q9HC97 309 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 TCFL5Q9UL49 500 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 ARFGEF3Q5TH69 2177 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 IGHEP01854 428 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 CRISP2P16562 243 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 G6PCP35575 357 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 SRPXP78539 464 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 ZNF90Q03938 601 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 LRRC75BQ2VPJ9 315 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 FBXL7Q9UJT9 491 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 SPTA1P02549 2419 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 LOC102725191A0A1B0GVB3 256 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 TFF1P04155 84 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 GNB1P62873 340 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 HLA-DRB5Q30154 266 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 NUFIP2Q7Z417 695 aaKnown RBP11.66□□□□□ -0.54
SCARB2-227ENST00000640957 OR56B2PQ8NGI1 322 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 DEPPQ9NTK1 212 aa11.66□□□□□ -0.54
SCARB2-227ENST00000640957 DUXBA0A1W2PPF3 345 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 FCN1O00602 326 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 IGHV3-13P01766 116 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 IGHV3-7P01780 117 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 UMODP07911 640 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 CCL4P13236 92 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 PDLIM4P50479 330 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 LINC00310P59036 64 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 ARF1P84077 181 aaKnown RBP11.65□□□□□ -0.54
SCARB2-227ENST00000640957 SPSB1Q96BD6 273 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 MRGPRX4Q96LA9 322 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 TRAV1-1A0A0B4J248 108 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 AQP7P3A6NL99 342 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 RAMP3O60896 148 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 NDUFB8O95169 186 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 HBG1P69891 147 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 HBG2P69892 147 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 PSG4Q00888 419 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 TMEM183BQ1AE95 376 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 SPATA45Q537H7 98 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 CISD2Q8N5K1 135 aaKnown RBP11.65□□□□□ -0.54
SCARB2-227ENST00000640957 OR5AU1Q8NGC0 362 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 OR1F12Q8NHA8 337 aa11.65□□□□□ -0.54
SCARB2-227ENST00000640957 ATG2AQ2TAZ0 1938 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 TRBV20OR9-2A0A075B6H5 130 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 COTL1Q14019 142 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 MSMO1Q15800 293 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 COL5A1-AS1Q5SY13 56 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 RHBDD2Q6NTF9 364 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 NEIL1Q96FI4 390 aaPredicted RBP11.64□□□□□ -0.55
SCARB2-227ENST00000640957 WDYHV1Q96HA8 205 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 SIT1Q9Y3P8 196 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 A0A1W2PQM1 296 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 DIRC3C9JPN6 131 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 ZIC3O60481 467 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 KITLGP21583 273 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 RPL15P61313 204 aaKnown RBP11.64□□□□□ -0.55
SCARB2-227ENST00000640957 TGIF2LYQ8IUE0 185 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 SLC35E1Q96K37 410 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 P2RX4Q99571 388 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 GGCTO75223 188 aaKnown RBP11.64□□□□□ -0.55
SCARB2-227ENST00000640957 TNFSF13O75888 250 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 CLDN14O95500 239 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms