RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 LIFP15018 202 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 HSPE1P61604 102 aaKnown RBP7.74□□□□□ -1.17
GABRB3-216ENST00000628124 SRSF5Q13243 272 aaKnown RBP7.74□□□□□ -1.17
GABRB3-216ENST00000628124 SLC25A53Q5H9E4 307 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 VAX1Q5SQQ9 334 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 CBLN3Q6UW01 205 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 TMEM186Q96B77 213 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 CCL13Q99616 98 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 KLK15Q9H2R5 256 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 A0A0U1RQV5 110 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 A0A1B0GWB2 263 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 HAX1O00165 279 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 ADRA2AP08913 450 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 STARD6P59095 220 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 ZNF385CQ66K41 422 aaPredicted RBP7.74□□□□□ -1.17
GABRB3-216ENST00000628124 QTRT1Q9BXR0 403 aaKnown RBP7.74□□□□□ -1.17
GABRB3-216ENST00000628124 LRRC37A3O60309 1634 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 NPIPB8E9PQR5 432 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 NPIPB9F8W1W9 429 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 NPIPB7O75200 414 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 CCL8P80075 99 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 DCAF10Q5QP82 559 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 SMOC1Q9H4F8 434 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 PLSCR2Q9NRY7 297 aa7.74□□□□□ -1.17
GABRB3-216ENST00000628124 A0A0G2JLM5 398 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 A0A1B0GW15 77 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 HOXA3O43365 443 aaPredicted RBP7.73□□□□□ -1.17
GABRB3-216ENST00000628124 CD1AP06126 327 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 HCP5Q6MZN7 132 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 TMEM252Q8N6L7 170 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 OR9G1Q8NH87 305 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 CLDND2Q8NHS1 167 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 MYO18AQ92614 2054 aaKnown RBP7.73□□□□□ -1.17
GABRB3-216ENST00000628124 ZNF98A6NK75 572 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 LINC01565O15544 149 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 ZNF688P0C7X2 276 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 NAT1P18440 290 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 ARF6P62330 175 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 ZIC1Q15915 447 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 XAF1Q6GPH4 301 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 TAF15Q92804 592 aaKnown RBP eCLIP7.73□□□□□ -1.17
GABRB3-216ENST00000628124 PRR13Q9NZ81 148 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 ST6GALNAC2Q9UJ37 374 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 COL16A1Q07092 1604 aaPredicted RBP7.73□□□□□ -1.17
GABRB3-216ENST00000628124 ISG15P05161 165 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 FCARP24071 287 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 SRIP30626 198 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 UCP2P55851 309 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 HBBP68871 147 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 C9orf62Q8N4C0 152 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 WFIKKN1Q96NZ8 548 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 YAE1D1Q9NRH1 226 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 KCNK7Q9Y2U2 307 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 MALP21145 153 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 FAM27BQ5VT28 67 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 DTX2Q86UW9 622 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 FOXC2Q99958 501 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 TMEM222Q9H0R3 208 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 PHLPP1O60346 1717 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 A0A1W2PPE3 182 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 NPIPB4C9JG80 1138 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 RRHO14718 337 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 AGAP20933 346 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 TMPRSS3P57727 454 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 LCN2P80188 198 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 INSL4Q14641 139 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 TMEM95Q3KNT9 176 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 FAM214BQ7L5A3 538 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 HIST1H2BAQ96A08 127 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 NEU1Q99519 415 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 TMEM106BQ9NUM4 274 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 CISD1Q9NZ45 108 aaKnown RBP7.73□□□□□ -1.17
GABRB3-216ENST00000628124 JPT1Q9UK76 154 aa7.73□□□□□ -1.17
GABRB3-216ENST00000628124 TCRBV16S1A1N1A0A5B0 115 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 C3AR1Q16581 482 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 GATAD1Q8WUU5 269 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 TMEM160Q9NX00 188 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 PPIAL4CA0A0B4J2A2 164 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 PRR33A8MZF0 331 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 PPIAL4GP0DN37 164 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 ERGP11308 486 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 PAX1P15863 534 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 OR5A1Q8NGJ0 315 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 PKIBQ9C010 78 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 BRWD1Q9NSI6 2320 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 NKX2-8O15522 239 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 TSPAN2O60636 221 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 DDTP30046 118 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 RPS11P62280 158 aaKnown RBP eCLIP7.72□□□□□ -1.17
GABRB3-216ENST00000628124 LHX8Q68G74 356 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 Q6AWC8 147 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 FAM71F2Q6NXP2 309 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 VN1R4Q7Z5H5 301 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 LRTM2Q8N967 370 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 ADAD2Q8NCV1 583 aaKnown RBP7.72□□□□□ -1.17
GABRB3-216ENST00000628124 ZNF418Q8TF45 676 aaPredicted RBP7.72□□□□□ -1.17
GABRB3-216ENST00000628124 FGF11Q92914 225 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 SERGEFQ9UGK8 458 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 TRAV8-6A0A0B4J262 113 aa7.72□□□□□ -1.17
GABRB3-216ENST00000628124 CDC42EP2O14613 210 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms