RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 PQLC2LA1A4F0 135 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 MEIS3P1A6NDR6 274 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 OR5H1A6NKK0 313 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 CD300LBA8K4G0 201 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 ZNF732B4DXR9 585 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 J3QT63 122 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 M0R1B8 84 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 ARPC1BO15143 372 aaKnown RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 SPRY1O43609 319 aaPredicted RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 LANCL1O43813 399 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 CREBL2O60519 120 aaPredicted RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 SMPD2O60906 423 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 TNFSF13O75888 250 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 NDUFB6O95139 128 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 RLN1P04808 185 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 MELTFP08582 738 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 GP9P14770 177 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 GABRR1P24046 479 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 ACKR3P25106 362 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 HAAOP46952 286 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 EIF2B2P49770 351 aaKnown RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 GPM6AP51674 278 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 TDGF1P3P51864 188 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 UCP2P55851 309 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 RRAS2P62070 204 aaPredicted RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 TSPAN5P62079 268 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 PDZK1IP1Q13113 114 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 CBX3Q13185 183 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 TNK1Q13470 666 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 MPV17LQ2QL34 196 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 CHRFAM7AQ494W8 412 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 SCGB2B2Q4G0G5 96 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 ASPHD2Q6ICH7 369 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 OR4A47Q6IF82 309 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 OR10K2Q6IF99 312 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 DNM1P46Q6ZS02 220 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 RFPL4BQ6ZWI9 263 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 LYPD6Q86Y78 171 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 BPIFB2Q8N4F0 458 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 KLHDC1Q8N7A1 406 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 BHLHE23Q8NDY6 225 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 OR4C16Q8NGL9 310 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 NEK7Q8TDX7 302 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 SSC4DQ8WTU2 575 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 GIMAP1Q8WWP7 306 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 AQP3Q92482 292 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 UPRTQ96BW1 309 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 CMBLQ96DG6 245 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 SEH1LQ96EE3 360 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 SLC25A21Q9BQT8 299 aaPredicted RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 ADAT1Q9BUB4 502 aaKnown RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 PECRQ9BY49 303 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 PKIBQ9C010 78 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 CHST6Q9GZX3 395 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 LPAR5Q9H1C0 372 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 OR10A4Q9H209 315 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 NOX3Q9HBY0 568 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 KLK11Q9UBX7 282 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 ZNF629Q9UEG4 869 aaPredicted RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 RNF150Q9ULK6 438 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 ST3GAL6Q9Y274 331 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 STARD10Q9Y365 291 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 RHBDD3Q9Y3P4 386 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 FAM215AQ9Y5M1 114 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 PKD1L1Q8TDX9 2849 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 ANK2Q01484 3957 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 CSPG4Q6UVK1 2322 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 TRGV8A0A0C4DH27 118 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 A0A1B0GUH1 482 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 LRP5LA4QPB2 252 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 C5orf63A6NC05 138 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SNRPGP15A8MWD9 76 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 IQCF6A8MYZ5 107 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SHISA9B4DS77 424 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 MCRIP1C9JLW8 97 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 K7EQD1 137 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 MFNGO00587 321 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 PDCD6O75340 191 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SNAPC5O75971 98 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 CD74P04233 296 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 CD3DP04234 171 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 FCER2P06734 321 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 CECR9P0C854 216 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 DUX4L4P0CJ87 422 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 PTHLHP12272 177 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ANXA3P12429 323 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 FUT3P21217 361 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 DTYMKP23919 212 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 BTCP35070 178 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 MDH2P40926 338 aaKnown RBP3.81□□□□□ -1.8
VPS29-212ENST00000621131 PMELP40967 661 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 GLP1RP43220 463 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ZNF83P51522 516 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 CCR6P51684 374 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 RBM11P57052 281 aaKnown RBP3.81□□□□□ -1.8
VPS29-212ENST00000621131 QRFPP83859 136 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 IL24Q13007 206 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 MAB21L1Q13394 359 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 CARTPTQ16568 116 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 LINC00303Q3SY05 128 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms