RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 MOB3BQ86TA1 216 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 C1orf174Q8IYL3 243 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 TICRRQ7Z2Z1 1910 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 TRBV6-7A0A0A0MS04 114 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 TRAV38-1A0A0B4J264 116 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 A0A1W2PPE3 182 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 PQLC2LA1A4F0 135 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 OPN3Q9H1Y3 402 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-210ENST00000618939 NTN3O00634 580 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-210ENST00000618939 ZNF883P0CG24 379 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 HOXA6P31267 233 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 TPPP2P59282 170 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 SRSF3P84103 164 aaKnown RBP11.85□□□□□ -0.51
CNOT3-210ENST00000618939 OR4P4Q8NGL7 312 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 FGFBP3Q8TAT2 258 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 PRO1933Q9H354 126 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 IGKV1-12A0A0C4DH73 117 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 PDE6DO43924 150 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 SPINK4O60575 86 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 EIF3GO75821 320 aaKnown RBP eCLIP11.85□□□□□ -0.51
CNOT3-210ENST00000618939 IGKV1D-12P01611 117 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 IQCJQ1A5X6 159 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 WBP1Q96G27 269 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 NAT8BQ9UHF3 227 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 ZNF835Q9Y2P0 537 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 LRRC3CA6NJW4 275 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 MPV17P39210 176 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 HIST1H3AP68431 136 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 PACRGQ96M98 296 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-210ENST00000618939 RPRMQ9NS64 109 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 PRNDQ9UKY0 176 aa11.85□□□□□ -0.51
CNOT3-210ENST00000618939 GYPAP02724 150 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 MDKP21741 143 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-210ENST00000618939 TMEM167BQ9NRX6 74 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 AURKAIP1Q9NWT8 199 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-210ENST00000618939 PTBP3O95758 552 aaKnown RBP11.84□□□□□ -0.51
CNOT3-210ENST00000618939 OR2V2Q96R30 315 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 DOK5Q9P104 306 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 AHRRA9YTQ3 701 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 TRGC2P03986 189 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 FBP1P09467 338 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 LHX2P50458 406 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 ACSM6Q6P461 480 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 TECRQ9NZ01 308 aaKnown RBP11.84□□□□□ -0.51
CNOT3-210ENST00000618939 FUT9Q9Y231 359 aa11.84□□□□□ -0.51
CNOT3-210ENST00000618939 ODAMA1E959 279 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 FCN1O00602 326 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 S1PR2O95136 353 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 CLDN18P56856 261 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 PSG5Q15238 335 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 TEPPQ6URK8 271 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 C16orf82Q7Z2V1 217 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 C18orf12Q96KH6 178 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 GP6Q9HCN6 339 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 PITPNC1Q9UKF7 332 aa11.83□□□□□ -0.51
CNOT3-210ENST00000618939 RAB29O14966 203 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 CT45A10P0DMU9 189 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 GLIPR1P48060 266 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 GLRX5Q86SX6 157 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 RHOVQ96L33 236 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 P2RX4Q99571 388 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 TMEM56-RWDD3S4R434 201 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 IGKV1D-13A0A0B4J2D9 117 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 ZG16O60844 167 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 FTH1P19P0C7X4 201 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 IGKV1-13P0DP09 117 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 KRTDAPP60985 99 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 SPCS3P61009 180 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 GGNQ86UU5 652 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 MS4A10Q96PG2 267 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 ROS1P08922 2347 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 CHEK1O14757 476 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 UBE2L3P68036 154 aaKnown RBP11.83□□□□□ -0.52
CNOT3-210ENST00000618939 C9orf152Q5JTZ5 239 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 ZNF385CQ66K41 422 aaPredicted RBP11.83□□□□□ -0.52
CNOT3-210ENST00000618939 MISP3Q96FF7 219 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 SAP30LQ9HAJ7 183 aa11.83□□□□□ -0.52
CNOT3-210ENST00000618939 PINLYPA6NC86 204 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 PROB1E7EW31 1015 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 CXorf1O96002 111 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 PAX6P26367 422 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 SSTP61278 116 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 SRSF4Q08170 494 aaKnown RBP11.82□□□□□ -0.52
CNOT3-210ENST00000618939 BSCL2Q96G97 398 aaPredicted RBP11.82□□□□□ -0.52
CNOT3-210ENST00000618939 IGKV1-27A0A075B6S5 117 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 MARCH11A6NNE9 402 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 ARL3P36405 182 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 TOMM20LQ6UXN7 152 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 Q6ZT83 130 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 RAB24Q969Q5 203 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 HARBI1Q96MB7 349 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 PSMG3Q9BT73 122 aaPredicted RBP11.82□□□□□ -0.52
CNOT3-210ENST00000618939 NUP210Q8TEM1 1887 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms