RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 C8orf4Q9NR00 106 aa11.41□□□□□ -0.58
XRCC1-205ENST00000595789 WASHC3Q9Y3C0 194 aa11.41□□□□□ -0.58
XRCC1-205ENST00000595789 EPPK1P58107 5090 aaKnown RBP11.4□□□□□ -0.58
XRCC1-205ENST00000595789 FOXI3A8MTJ6 420 aaPredicted RBP11.4□□□□□ -0.58
XRCC1-205ENST00000595789 GSTP1P09211 210 aaKnown RBP11.4□□□□□ -0.58
XRCC1-205ENST00000595789 CEACAM6P40199 344 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 LINC00205P59089 165 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 PLGLAQ15195 96 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 UNQ5815/PRO19632Q6UWF5 114 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 MOB1BQ7L9L4 216 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 FAM89BQ8N5H3 189 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 MS4A15Q8N5U1 240 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 BPIFB6Q8NFQ5 453 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 PTX4Q96A99 478 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.58
XRCC1-205ENST00000595789 CLCC1Q96S66 551 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 TM2D3Q9BRN9 247 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 HDHD3Q9BSH5 251 aaPredicted RBP11.4□□□□□ -0.58
XRCC1-205ENST00000595789 LPAR5Q9H1C0 372 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 OR1A1Q9P1Q5 309 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 RNF150Q9ULK6 438 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 TNCP24821 2201 aa11.4□□□□□ -0.58
XRCC1-205ENST00000595789 H7C2Y5 167 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 ARPC1BO15143 372 aaKnown RBP11.39□□□□□ -0.59
XRCC1-205ENST00000595789 SOCS1O15524 211 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 IGLV1-51P01701 117 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 LYL1P12980 280 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 SRMP19623 302 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 TMEM50BP56557 158 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 SSBP2P81877 361 aaPredicted RBP11.39□□□□□ -0.59
XRCC1-205ENST00000595789 RNLSQ5VYX0 342 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 C8orf59Q8N0T1 100 aaPredicted RBP11.39□□□□□ -0.59
XRCC1-205ENST00000595789 ZNF383Q8NA42 475 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 DRAXINQ8NBI3 349 aaPredicted RBP11.39□□□□□ -0.59
XRCC1-205ENST00000595789 OR4C12Q96R67 309 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 CITED4Q96RK1 184 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 RIMS4Q9H426 269 aaPredicted RBP11.39□□□□□ -0.59
XRCC1-205ENST00000595789 SLA2Q9H6Q3 261 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 C19orf73Q9NVV2 129 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 PLEKHJ1Q9NW61 149 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 GAR1Q9NY12 217 aaKnown RBP11.39□□□□□ -0.59
XRCC1-205ENST00000595789 METTL1Q9UBP6 276 aaKnown RBP11.39□□□□□ -0.59
XRCC1-205ENST00000595789 AK3Q9UIJ7 227 aa11.39□□□□□ -0.59
XRCC1-205ENST00000595789 LSM2Q9Y333 95 aaKnown RBP11.39□□□□□ -0.59
XRCC1-205ENST00000595789 IGKV1-6A0A0C4DH72 117 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 A8MZ25 164 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 BPNT1O95861 308 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 CA2P00918 260 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 SCTP09683 121 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 TPPP2P59282 170 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 PITPNAQ00169 270 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 RBM48Q5RL73 367 aaKnown RBP11.38□□□□□ -0.59
XRCC1-205ENST00000595789 HAPLN4Q86UW8 402 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 SETD6Q8TBK2 473 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 ABHD5Q8WTS1 349 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 GFI1Q99684 422 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 TMED9Q9BVK6 235 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 ZMAT4Q9H898 229 aa11.38□□□□□ -0.59
XRCC1-205ENST00000595789 CHMP1AQ9HD42 196 aaPredicted RBP11.38□□□□□ -0.59
XRCC1-205ENST00000595789 SPDEFO95238 335 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 TRGV3P03979 118 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 TFAP2AP05549 437 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 CDK1P06493 297 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 UCHL1P09936 223 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 IGHV4-30-4P0DP06 118 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 ZBTB25P24278 435 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 HLA-DRB3P79483 266 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 SRSF7Q16629 238 aaKnown RBP eCLIP11.37□□□□□ -0.59
XRCC1-205ENST00000595789 HSD17B12Q53GQ0 312 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 IL34Q6ZMJ4 242 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 CEACAM19Q7Z692 300 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 OR6M1Q8NGM8 313 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 EDARADDQ8WWZ3 215 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 TSNAXQ99598 290 aaKnown RBP11.37□□□□□ -0.59
XRCC1-205ENST00000595789 EDA2RQ9HAV5 297 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 Q9N2K0 584 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 HSF4Q9ULV5 492 aa11.37□□□□□ -0.59
XRCC1-205ENST00000595789 BIRC6Q9NR09 4857 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 EBAG9O00559 213 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 LDLRAD4O15165 306 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 HSPA12AO43301 675 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 IGLV2-23P01705 113 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 CRYGBP07316 175 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 CPEP16870 476 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 RPS16P62249 146 aaKnown RBP11.36□□□□□ -0.59
XRCC1-205ENST00000595789 KLF5Q13887 457 aaPredicted RBP11.36□□□□□ -0.59
XRCC1-205ENST00000595789 FXYD3Q14802 87 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 POC5Q8NA72 575 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 ELOVL1Q9BW60 279 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 MND1Q9BWT6 205 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 RANGRFQ9HD47 186 aaPredicted RBP11.36□□□□□ -0.59
XRCC1-205ENST00000595789 STUB1Q9UNE7 303 aa11.36□□□□□ -0.59
XRCC1-205ENST00000595789 LCE6AA0A183 80 aa11.35□□□□□ -0.59
XRCC1-205ENST00000595789 SLC25A17O43808 307 aa11.35□□□□□ -0.59
XRCC1-205ENST00000595789 CD40LGP29965 261 aa11.35□□□□□ -0.59
XRCC1-205ENST00000595789 PJVKQ0ZLH3 352 aa11.35□□□□□ -0.59
XRCC1-205ENST00000595789 P2RY14Q15391 338 aa11.35□□□□□ -0.59
XRCC1-205ENST00000595789 SPHARQ15513 63 aa11.35□□□□□ -0.59
XRCC1-205ENST00000595789 OGFRL1Q5TC84 451 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms