RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 ESM1Q9NQ30 184 aa11.69□□□□□ -0.54
NPLOC4-218ENST00000574964 ZNF107Q9UII5 783 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-218ENST00000574964 RBMX2Q9Y388 322 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-218ENST00000574964 NIPBLQ6KC79 2804 aaeCLIP11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 CRYBA1P05813 215 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 FAM106CPP0CH98 169 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 AKAIN1P0CW23 69 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 CD24P25063 80 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 UBA52P62987 128 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 MEF2DQ14814 521 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 VAX1Q5SQQ9 334 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 TRIQKQ629K1 86 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 DHRS11Q6UWP2 260 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 MRPL20Q9BYC9 149 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 CHIAQ9BZP6 476 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 SRRQ9GZT4 340 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 SLC5A7Q9GZV3 580 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 SDHAF2Q9NX18 166 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 VPREB3Q9UKI3 123 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 GAB2Q9UQC2 676 aa11.68□□□□□ -0.54
NPLOC4-218ENST00000574964 IGKV1D-13A0A0B4J2D9 117 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 DISC1C4P0D8 188 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 CLDN34H7C241 214 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 AMY2AP04746 511 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 SNRNP70P08621 437 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 IGKV1-13P0DP09 117 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 AP3S2P59780 193 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 ZNF57Q68EA5 555 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 C16orf87Q6PH81 154 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 PRIMA1Q86XR5 153 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 TOMM5Q8N4H5 51 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 ARRDC1Q8N5I2 433 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 ZNF645Q8N7E2 425 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 BORCS5Q969J3 196 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 NABP2Q9BQ15 211 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 ZNF251Q9BRH9 671 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 RAB18Q9NP72 206 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 CCL28Q9NRJ3 127 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 TCF19Q9Y242 345 aa11.67□□□□□ -0.54
NPLOC4-218ENST00000574964 ANKRD20A5PA0PJZ0 165 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 H7C2Y5 167 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 IGKV1D-33P01593 117 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 IGKV1-33P01594 117 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 APOA2P02652 100 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 CD74P04233 296 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 TMEM11P17152 192 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 CD1BP29016 333 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 FAUP35544 74 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 LSAMPQ13449 338 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 HNF4GQ14541 408 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 SCGB2B2Q4G0G5 96 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 GLDNQ6ZMI3 551 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 THNSL2Q86YJ6 484 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 DRAXINQ8NBI3 349 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 OR2T10Q8NGZ9 312 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 PIFOQ8TCI5 191 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 CFHR4Q92496 578 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 MOB3AQ96BX8 217 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 MCUBQ9NWR8 336 aa11.66□□□□□ -0.54
NPLOC4-218ENST00000574964 A6NDX4 124 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 GPR137BO60478 399 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 CT45A6P0DMU7 189 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 CT45A5P0DMU8 189 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 CT45A7P0DMV0 189 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 MC5RP33032 325 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 THBS3P49746 956 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 ZNF660Q6AZW8 331 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 DHRS7BQ6IAN0 325 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 LIAT1Q6ZQX7 453 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 TMEM219Q86XT9 240 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 ZBTB34Q8NCN2 500 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 OR4D10Q8NGI6 311 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 OR4C16Q8NGL9 310 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 ADTRPQ96IZ2 230 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 AKIP1Q9NQ31 210 aa11.65□□□□□ -0.54
NPLOC4-218ENST00000574964 OR5H14A6NHG9 310 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 FAM90A9PA6NNJ1 464 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 PROP1O75360 226 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 MOSP00540 346 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 PGAM2P15259 253 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 S100GP29377 79 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 CBX3Q13185 183 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 HABP2Q14520 560 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 ZNF846Q147U1 533 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 BAK1Q16611 211 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 FAAP20Q6NZ36 180 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 MFSD4AQ8N468 514 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 ZFAND2BQ8WV99 257 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 TRIM63Q969Q1 353 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 SLC25A33Q9BSK2 321 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 WDR12Q9GZL7 423 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 SLC35D1Q9NTN3 355 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
NPLOC4-218ENST00000574964 WASHC3Q9Y3C0 194 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms