RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 OTOFQ9HC10 1997 aa2.19□□□□□ -2.06
SYNE2-210ENST00000553455 PCNX2A6NKB5 2137 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 FHAD1B1AJZ9 1412 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 NUP160Q12769 1436 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 MYO9BQ13459 2157 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 F5H768 121 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 MRASO14807 208 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 ZW10O43264 779 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 STX10O60499 249 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 ESDP10768 282 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 CPMP14384 443 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 UGT2B7P16662 529 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 ZNF7P17097 686 aaPredicted RBP2.18□□□□□ -2.06
SYNE2-210ENST00000553455 BLVRBP30043 206 aaPredicted RBP2.18□□□□□ -2.06
SYNE2-210ENST00000553455 CD79BP40259 229 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 FAM9CQ8IZT9 166 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 TMEM251Q8N6I4 163 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 CCDC112Q8NEF3 446 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 ASB13Q8WXK3 278 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 PACRGQ96M98 296 aaPredicted RBP2.18□□□□□ -2.06
SYNE2-210ENST00000553455 STACQ99469 402 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 HDHD2Q9H0R4 259 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 SPANXB1Q9NS25 103 aaPredicted RBP2.18□□□□□ -2.06
SYNE2-210ENST00000553455 PSMD13Q9UNM6 376 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 MINOS1-NBL1R4GNA1 71 aa2.18□□□□□ -2.06
SYNE2-210ENST00000553455 CLASP1Q7Z460 1538 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 ABCA5Q8WWZ7 1642 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 IGHV3-73A0A0B4J1V6 119 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 DHRS12A0PJE2 317 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 ZNF189O75820 626 aaPredicted RBP2.17□□□□□ -2.06
SYNE2-210ENST00000553455 CD7P09564 240 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 OR10J1P30954 320 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 IFNGR2P38484 337 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 LPAR6P43657 344 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 GABRA4P48169 554 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 TMEM156Q8N614 296 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 OR4C16Q8NGL9 310 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 OR10A6Q8NH74 314 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 ERMNQ8TAM6 284 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 MBOAT7Q96N66 472 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 NSRP1Q9H0G5 558 aaKnown RBP2.17□□□□□ -2.06
SYNE2-210ENST00000553455 HHLA2Q9UM44 414 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 SYNJ1O43426 1573 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 MYO16Q9Y6X6 1858 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 KIAA0586Q9BVV6 1533 aa2.17□□□□□ -2.06
SYNE2-210ENST00000553455 EIF4G3O43432 1585 aaKnown RBP2.16□□□□□ -2.06
SYNE2-210ENST00000553455 A0A1W2PP64 1363 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 A0A0J9YX75 114 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 VPS37CA5D8V6 355 aaPredicted RBP2.16□□□□□ -2.06
SYNE2-210ENST00000553455 TPM3P06753 285 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 SLC25A16P16260 332 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 CSRP1P21291 193 aaKnown RBP2.16□□□□□ -2.06
SYNE2-210ENST00000553455 CRYBB3P26998 211 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 RWDD2BP57060 319 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 TPM4P67936 248 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 OR4K13Q8NH42 304 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 CMTM5Q96DZ9 223 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 MGLLQ99685 303 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 PSORS1C2Q9UIG4 136 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 HDGFL3Q9Y3E1 203 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 SHROOM2Q13796 1616 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 PLCH2O75038 1416 aa2.16□□□□□ -2.06
SYNE2-210ENST00000553455 GRIN2AQ12879 1464 aa2.15□□□□□ -2.06
SYNE2-210ENST00000553455 PRXQ9BXM0 1461 aa2.15□□□□□ -2.06
SYNE2-210ENST00000553455 ATG2BQ96BY7 2078 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 TEX50A0A1B0GTY4 177 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 CCL3P10147 92 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 NPPCP23582 126 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 CA7P43166 264 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 SNAP25P60880 206 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 MED21Q13503 144 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 TMEM176BQ3YBM2 270 aaPredicted RBP2.15□□□□□ -2.07
SYNE2-210ENST00000553455 FAM151BQ6UXP7 276 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 FNDC9Q8TBE3 224 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 Q8WTZ3 238 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 KCTD7Q96MP8 289 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 TIPINQ9BVW5 301 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 DERL2Q9GZP9 239 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 ARHGEF11O15085 1522 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 EEA1Q15075 1411 aa2.15□□□□□ -2.07
SYNE2-210ENST00000553455 SNAPC4Q5SXM2 1469 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 TRAV8-1A0A0A6YYK1 113 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 ATP6V0CP27449 155 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 FABP5Q01469 135 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 C1orf174Q8IYL3 243 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 PHOSPHO2Q8TCD6 241 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 C16orf78Q8WTQ4 265 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 NKX6-2Q9C056 277 aaPredicted RBP2.14□□□□□ -2.07
SYNE2-210ENST00000553455 TXNL4BQ9NX01 149 aaKnown RBP2.14□□□□□ -2.07
SYNE2-210ENST00000553455 SNX12Q9UMY4 172 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 MMACHCQ9Y4U1 282 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 CHD1O14646 1710 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 UHRF1BP1LA0JNW5 1464 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 ARAP1Q96P48 1450 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 RAPGEF2Q9Y4G8 1499 aa2.14□□□□□ -2.07
SYNE2-210ENST00000553455 DSCAMO60469 2012 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 RIMBP3CA6NJZ7 1639 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 RIMBP3BA6NNM3 1639 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 RIMBP3Q9UFD9 1639 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 UGGT2Q9NYU1 1516 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms