RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 UPRTQ96BW1 309 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 HDHD3Q9BSH5 251 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-213ENST00000550629 HEXA-AS1Q9H8Q6 139 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF286AQ9HBT8 521 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 LPAR2Q9HBW0 351 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 IFT46Q9NQC8 304 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 MMP26Q9NRE1 261 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 ONECUT1Q9UBC0 465 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 MTFP1Q9UDX5 166 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 ANXA10Q9UJ72 324 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 JPT1Q9UK76 154 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 KCNS2Q9ULS6 477 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 RBMX2Q9Y388 322 aaKnown RBP4.67□□□□□ -1.66
SCAF11-213ENST00000550629 AUP1Q9Y679 476 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 SESN1Q9Y6P5 492 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 TRBV6-7A0A0A0MS04 114 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 MEIOCA2RUB1 952 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF736B4DX44 427 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-213ENST00000550629 SDCBPO00560 298 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-213ENST00000550629 ITGB1BP1O14713 200 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 RGS11O94810 467 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 HBZP02008 142 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 CSF1P09603 554 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 GSTT2BP0CG30 244 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 PSG1P11464 419 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 CCL3L1P16619 93 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 HNF1AP20823 631 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 CD40LGP29965 261 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 SSTR5P35346 364 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 UBE2E1P51965 193 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 AP3S2P59780 193 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 ARF6P62330 175 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 SCGB2A2Q13296 93 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF846Q147U1 533 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF79Q15937 498 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 CHRFAM7AQ494W8 412 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 MIDNQ504T8 468 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 PYDC2Q56P42 97 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 VAX1Q5SQQ9 334 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 FAHD2BQ6P2I3 314 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-213ENST00000550629 Q8N402 240 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 BEST4Q8NFU0 473 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 OR11H6Q8NGC7 330 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 OR5AP2Q8NGF4 316 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 OR52L2PQ8NGH6 319 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 OR13D1Q8NGV5 346 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 OR52I2Q8NH67 350 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 OR10J5Q8NHC4 309 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 SETD6Q8TBK2 473 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 CCDC107Q8WV48 283 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 CREB3L1Q96BA8 519 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 FAHD2AQ96GK7 314 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 CABLES2Q9BTV7 478 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 CCDC32Q9BV29 185 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 ST6GALNAC5Q9BVH7 336 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 WDR12Q9GZL7 423 aaKnown RBP4.66□□□□□ -1.66
SCAF11-213ENST00000550629 SRRQ9GZT4 340 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 TOLLIPQ9H0E2 274 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 TMEM133Q9H2Q1 129 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 GHITMQ9H3K2 345 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 NECAP2Q9NVZ3 263 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 IDI2-AS1Q9NZ38 188 aa4.66□□□□□ -1.66
SCAF11-213ENST00000550629 ELF5Q9UKW6 265 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-213ENST00000550629 TRAV39A0A0B4J263 110 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 IGKV1-6A0A0C4DH72 117 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 CYSRT1A8MQ03 144 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 A8MV72 311 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-213ENST00000550629 YPEL1O60688 119 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 CD74P04233 296 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 SCTP09683 121 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 PTHLHP12272 177 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 OR3A3P47888 321 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 RAB7AP51149 207 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 PPP5CP53041 499 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 PRRX1P54821 245 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 TAS2R19P59542 299 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 ARPC4P59998 168 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 MEF2DQ14814 521 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 PRAMEF5Q5TYX0 476 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 DHRS11Q6UWP2 260 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 C9orf139Q6ZV77 190 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 VMO1Q7Z5L0 202 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 ABHD12Q8N2K0 398 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 ARRDC1Q8N5I2 433 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 LINC00311Q8N616 119 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 TMEM229BQ8NBD8 167 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 OR5H2Q8NGV7 314 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 OR9G1Q8NH87 305 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 OR1L1Q8NH94 360 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 RFESDQ8TAC1 157 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 NANPQ8TBE9 248 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF596Q8TC21 504 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 GLMPQ8WWB7 406 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 IL1F10Q8WWZ1 152 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 SNAPC3Q92966 411 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 TRIM63Q969Q1 353 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 CYYR1Q96J86 154 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 YPEL2Q96QA6 119 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 TBX15Q96SF7 602 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 PCGF1Q9BSM1 259 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms