RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 FAM90A8PA6NJQ4 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A7PA6NKC0 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A22PA8MWA6 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A12PA8MX19 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A5PA8MXJ8 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A23PA8MXZ1 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 DNPH1O43598 174 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 NDUFB3O43676 98 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BKO60814 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BJP06899 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A15PP0C7V4 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A13PP0C7W8 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A14PP0C7W9 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A24PP0C7X0 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FGF5P12034 268 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BOP23527 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BBP33778 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BDP58876 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BCP62807 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST2H2BEQ16778 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 DPF1Q92782 380 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BHQ93079 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BNQ99877 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 HIST1H2BMQ99879 126 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 OPN3Q9H1Y3 402 aaPredicted RBP13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 C3orf80F5H4A9 247 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 K7EQS6 105 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 SYNGR1O43759 233 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FABP2P12104 132 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 SCGB1D4Q6XE38 83 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 TGIF2LYQ8IUE0 185 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 RTBDNQ9BSG5 229 aaPredicted RBP13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 H0YIZ8 118 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 DLL1O00548 723 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 AESQ08117 197 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 LRRC10Q5BKY1 277 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 OR10S1Q8NGN2 331 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 PLA2G3Q9NZ20 509 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 TINAGQ9UJW2 476 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 hADV38S2A0JD32 116 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 OR2T8A6NH00 312 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 WNT5AP41221 380 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 NMUP48645 174 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 EGR4Q05215 589 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 ATOH7Q8N100 152 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 SMRP1Q8NCR6 262 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 OR5R1Q8NH85 324 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 ZCCHC14Q8WYQ9 949 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 CBLN1P23435 193 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 SFTPA2Q8IWL1 248 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 MMD2Q8IY49 270 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 TIMD4Q96H15 378 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 SFRP2Q96HF1 295 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 IL36RNQ9UBH0 155 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 RIF1Q5UIP0 2472 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 TNFSF15O95150 251 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 CADM4Q8NFZ8 388 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 OR52L2PQ8NGH6 319 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 TRBV9A0A0B4J1U6 114 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 C5orf67F2Z3F1 127 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 MKRN2OSH3BPM6 223 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 TBX6O95947 436 aaPredicted RBP13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 IZUMO4Q1ZYL8 232 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 ABHD3Q8WU67 409 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 PERPQ96FX8 193 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 GAL3ST2Q9H3Q3 398 aa13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 RALYQ9UKM9 306 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-212ENST00000550418 DPRXA6NFQ7 191 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 LYZL6O75951 148 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 PQLC2Q6ZP29 291 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 WFDC8Q8IUA0 241 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 J3QR06 171 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 CCL3P10147 92 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 PSG4Q00888 419 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 RELBQ01201 579 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 CEACAM21Q3KPI0 293 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 HES3Q5TGS1 186 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 MIC13Q5XKP0 118 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 LURAP1LQ8IV03 231 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 TUSC5Q8IXB3 177 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 RBM14Q96PK6 669 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 SDF2L1Q9HCN8 221 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 OR8B3Q8NGG8 313 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 TMEM45BQ96B21 275 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 TMEM140Q9NV12 185 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 J3QRE1 110 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 AMY1AP04745 511 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 TNFRSF9Q07011 255 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 ZNF818PQ6ZRF7 136 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM216AQ8WUB2 273 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 PAXXQ9BUH6 204 aa13.62□□□□□ -0.23
RBFOX1-212ENST00000550418 ZNF646O15015 1829 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 RPL7P18124 248 aaKnown RBP13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 EGR1P18146 543 aa13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 JOSD1Q15040 202 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms