RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
ATPAF1-212ENST00000542495 TMEM9BQ9NQ34 198 aa4.37□□□□□ -1.71
ATPAF1-212ENST00000542495 NIT2Q9NQR4 276 aa4.37□□□□□ -1.71
ATPAF1-212ENST00000542495 GNG13Q9P2W3 67 aa4.37□□□□□ -1.71
ATPAF1-212ENST00000542495 SPRR3Q9UBC9 169 aa4.37□□□□□ -1.71
ATPAF1-212ENST00000542495 HSPB7Q9UBY9 170 aa4.37□□□□□ -1.71
ATPAF1-212ENST00000542495 PPP1R3CQ9UQK1 317 aa4.37□□□□□ -1.71
ATPAF1-212ENST00000542495 POLDIP2Q9Y2S7 368 aa4.37□□□□□ -1.71
ATPAF1-212ENST00000542495 TRBV24-1A0A075B6N3 115 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TGIF2-C20orf24A0A0A6YYL0 155 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TRAV39A0A0B4J263 110 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TMEM210A6NLX4 147 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 PMS2P5A8MQ11 134 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 RNF212BA8MTL3 300 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 IQCF6A8MYZ5 107 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 KLRC4-KLRK1H3BQV0 150 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 SIRPB1O00241 398 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 SH2D1BO14796 132 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TGOLN2O43493 480 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BKO60814 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 WISP2O76076 250 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 CYB5R3P00387 301 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BJP06899 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 IAPPP10997 89 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 RAC2P15153 192 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 SPINK2P20155 84 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BOP23527 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BBP33778 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BDP58876 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 PPP1CBP62140 327 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BCP62807 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 SLC10A1Q14973 349 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST2H2BEQ16778 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TBC1D28Q2M2D7 210 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TMEM95Q3KNT9 176 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 NCMAPQ5T1S8 102 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 MYPOPQ86VE0 399 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 FGFRL1Q8N441 504 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF645Q8N7E2 425 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 RNASE11Q8TAA1 199 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TAF15Q92804 592 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BHQ93079 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BNQ99877 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST1H2BMQ99879 126 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 GGACTQ9BVM4 153 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 MRPL37Q9BZE1 423 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 ARRDC1-AS1Q9H2J1 176 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 ZDHHC11Q9H8X9 412 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 DOK5Q9P104 306 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 MIOXQ9UGB7 285 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 VAX2Q9UIW0 290 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TRAPPC2LQ9UL33 140 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 ACACBO00763 2458 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 SPTBN2O15020 2390 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 CNTRLQ7Z7A1 2325 aa4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 KMT2BQ9UMN6 2715 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-212ENST00000542495 TRGV5A0A0B4J1U4 118 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 TMEM30CPA0ZSE6 113 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SEC14L6B5MCN3 397 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CLDN34H7C241 214 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 PSPNO60542 156 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 YIF1AO95070 293 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 IGKV1D-33P01593 117 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 IGKV1-33P01594 117 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CELA3BP08861 270 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CD59P13987 128 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 MDKP21741 143 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CEACAM6P40199 344 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 MPLP40238 635 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CEBPGP53567 150 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 BRWD1-AS2P59051 145 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 RAB11AP62491 216 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 RPL30P62888 115 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 TNFRSF9Q07011 255 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SLC38A11Q08AI6 406 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 MRPL49Q13405 166 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ESPL1Q14674 2120 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 GUSBP1Q15486 140 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ATP6V1FQ16864 119 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF674Q2M3X9 581 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 VWC2Q2TAL6 325 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ALKBH6Q3KRA9 238 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 DNLZQ5SXM8 178 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SPATA46Q5T0L3 261 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 WDR25Q64LD2 544 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SLC35E4Q6ICL7 350 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SLC25A24Q6NUK1 477 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 LCN15Q6UWW0 184 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 P4HA3Q7Z4N8 544 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 C11orf53Q8IXP5 236 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 RPP25LQ8N5L8 163 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 TCTEX1D1Q8N7M0 179 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 C5orf30Q96GV9 206 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 GMPPAQ96IJ6 420 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 FAM210BQ96KR6 192 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 FER1L6-AS2Q96M78 137 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 PYGO2Q9BRQ0 406 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 OR2J1Q9GZK6 312 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms