RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GORASP2Q9H8Y8 452 aa2.69□□□□□ -1.98
YBX3-205ENST00000536107 TMEM14BQ9NUH8 114 aa2.69□□□□□ -1.98
YBX3-205ENST00000536107 RHCGQ9UBD6 479 aa2.69□□□□□ -1.98
YBX3-205ENST00000536107 METTL1Q9UBP6 276 aaKnown RBP2.69□□□□□ -1.98
YBX3-205ENST00000536107 KIF25Q9UIL4 384 aa2.69□□□□□ -1.98
YBX3-205ENST00000536107 ING4Q9UNL4 249 aa2.69□□□□□ -1.98
YBX3-205ENST00000536107 LINC00588Q9Y4M8 146 aa2.69□□□□□ -1.98
YBX3-205ENST00000536107 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 NPIPB11E5RHQ5 1161 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 H7C2Y5 167 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 TSPAN4O14817 238 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 SLC22A1O15245 554 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 ENTPD6O75354 484 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 NDUFA3O95167 84 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 SOX14O95416 240 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 TXNDC12O95881 172 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 GSTT2P0CG29 244 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 GSTT2BP0CG30 244 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 PSKH1P11801 424 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 ATP6V1B1P15313 513 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 HOXB9P17482 250 aaPredicted RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 EPHA2P29317 976 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 VHLP40337 213 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 POLR2JP52435 117 aaKnown RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 RHOGP84095 191 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 TRAM2Q15035 370 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 LPCAT4Q643R3 524 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 TBPL2Q6SJ96 375 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 CLEC19AQ6UXS0 136 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 MSANTD1Q6ZTZ1 278 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 MBOAT2Q6ZWT7 520 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 SMIM29Q86T20 159 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 GPHB5Q86YW7 130 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 KRTAP7-1Q8IUC3 87 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 SERPINA12Q8IW75 414 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 STHQ8IWL8 128 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 RNF113BQ8IZP6 322 aaKnown RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 OR52L2PQ8NGH6 319 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 OR10V1Q8NGI7 309 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 OR6K6Q8NGW6 343 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 OR6N2Q8NGY6 317 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 OR2T4Q8NH00 348 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 OR51E1Q8TCB6 317 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 GTF2H4Q92759 462 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 ARL11Q969Q4 196 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 FAM46BQ96A09 425 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 C10orf35Q96D05 121 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 RSRC1Q96IZ7 334 aaKnown RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 UHRF2Q96PU4 802 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 GPX7Q96SL4 187 aaPredicted RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 NIPSNAP3BQ9BS92 247 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 MRPL20Q9BYC9 149 aaKnown RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 Q9H3A6 140 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 HEYLQ9NQ87 328 aaPredicted RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 GPR84Q9NQS5 396 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 DCAF13Q9NV06 445 aaKnown RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 CLEC5AQ9NY25 188 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 MRPL27Q9P0M9 148 aaKnown RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 PSMC3IPQ9P2W1 217 aaPredicted RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 GNG12Q9UBI6 72 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 ZNF230Q9UIE0 474 aaPredicted RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 BAG5Q9UL15 447 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 TMEM5Q9Y2B1 443 aa2.68□□□□□ -1.98
YBX3-205ENST00000536107 EXOSC1Q9Y3B2 195 aaKnown RBP2.68□□□□□ -1.98
YBX3-205ENST00000536107 LPAP08519 4548 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 IGKV3-7A0A075B6H7 116 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 A0A087WUU8 490 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 TRBV2A0A0J9YWF9 115 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 FAM223BA6NKX1 122 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 ZNF705EA8MWA4 302 aaPredicted RBP2.67□□□□□ -1.98
YBX3-205ENST00000536107 SLC31A2O15432 143 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 LANCL1O43813 399 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 CCDC22O60826 627 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 IGHV3-23P01764 117 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 PRH1P02810 166 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 CSN2P05814 226 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 CTSDP07339 412 aaPredicted RBP2.67□□□□□ -1.98
YBX3-205ENST00000536107 CGB3P0DN86 165 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 CGB7P0DN87 165 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 DBTP11182 482 aaKnown RBP2.67□□□□□ -1.98
YBX3-205ENST00000536107 IDO1P14902 403 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 MYOD1P15172 320 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 ARL3P36405 182 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 OPRL1P41146 370 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 ZNF146Q15072 292 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 PTGES3Q15185 160 aaKnown RBP2.67□□□□□ -1.98
YBX3-205ENST00000536107 PAN3Q58A45 887 aaKnown RBP2.67□□□□□ -1.98
YBX3-205ENST00000536107 TMEM41BQ5BJD5 291 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 FAM209BQ5JX69 171 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 SLC25A30Q5SVS4 291 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 TMEM69Q5SWH9 247 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 LEMD1Q68G75 181 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 MORN3Q6PF18 240 aaPredicted RBP2.67□□□□□ -1.98
YBX3-205ENST00000536107 FAM223AQ8IWN6 122 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 SPAG16Q8N0X2 631 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 LINC00311Q8N616 119 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 ZNF781Q8N8C0 355 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 FANK1Q8TC84 345 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 THEM6Q8WUY1 208 aa2.67□□□□□ -1.98
YBX3-205ENST00000536107 RNF133Q8WVZ7 376 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms