RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 MUC20Q8N307 709 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 SPICQ8N5J4 248 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 PARP16Q8N5Y8 322 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 LINC01356Q8N9X3 169 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 TERB2Q8NHR7 220 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 MARCH1Q8TCQ1 289 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 FCGR1BQ92637 280 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 CREB3L1Q96BA8 519 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 SMIM19Q96E16 107 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 NKX6-2Q9C056 277 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 CHST5Q9GZS9 411 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 PLEKHA1Q9HB21 404 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 TRIM36Q9NQ86 728 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 KIAA1456Q9P272 454 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 STEAP1Q9UHE8 339 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 U3KQ87 197 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 F8P00451 2351 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 CR1P17927 2039 aa5.21□□□□□ -1.58
ATPAF1-209ENST00000529214 TRAV38-1A0A0B4J264 116 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 IGKV1-9A0A0C4DH69 117 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SCO2A0A1W2PP80 73 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 RPS10-NUDT3A0A1W2PQS6 291 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 C20orf202A1L168 122 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 TMEM213A2RRL7 107 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 CEACAM18A8MTB9 384 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SRRM5B3KS81 715 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 MYL12BO14950 172 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SOX15O60248 233 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 OR10J4P0C629 311 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ATF1P18846 271 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 FSTP19883 344 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 TAS2R43P59537 309 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SEC61GP60059 68 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 PPP3R1P63098 170 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 PLA2G7Q13093 441 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 DOC2BQ14184 412 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 IL13RA2Q14627 380 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SPHARQ15513 63 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 VAMP3Q15836 100 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 GCSAMLQ5JQS6 135 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 DHRS7BQ6IAN0 325 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 HAGHLQ6PII5 290 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 LYPD2Q6UXB3 125 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 PRSS48Q7RTY5 328 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SNX29P2Q8IUI4 249 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 BOLLQ8N9W6 283 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 DEFB108BQ8NET1 73 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 OR5D14Q8NGL3 314 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 OR5D13Q8NGL4 314 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 GPR148Q8TDV2 347 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 LRRC29Q8WV35 223 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 CCDC107Q8WV48 283 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ACOT12Q8WYK0 555 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 AQP3Q92482 292 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 RGP1Q92546 391 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 RAB39BQ96DA2 213 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 PGLYRP3Q96LB9 341 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 RSG1Q9BU20 258 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 BEX2Q9BXY8 128 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 WFDC1Q9HC57 220 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 RANGRFQ9HD47 186 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 PLEKHJ1Q9NW61 149 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SLC2A8Q9NY64 477 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 PITPNC1Q9UKF7 332 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 DHDHQ9UQ10 334 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 LSM2Q9Y333 95 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 FLNAP21333 2647 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 TANC2Q9HCD6 1990 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ZANQ9Y493 2812 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 IGKV1-27A0A075B6S5 117 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 TRBV5-5A0A0J9YX44 114 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SMCO3A2RU48 225 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 FAM74A7A6NL05 159 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 A8MXK9 166 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 M0R036 132 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 MRPS14O60783 128 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 FOXH1O75593 365 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 CNIH1O95406 144 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ARG1P05089 322 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 MSMBP08118 114 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 OR8U9P0C7N5 309 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 TMEM225BP0DP42 221 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ZNF20P17024 532 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 CELP19835 753 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 MPZP25189 248 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ZFP36P26651 326 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 PPIFP30405 207 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SSTR5P35346 364 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 RORCP51449 518 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ATP1B3P54709 279 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 DVL1P1P54792 670 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 RPS11P62280 158 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 GPR50Q13585 617 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 GUCA2BQ16661 112 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 SCGB2B2Q4G0G5 96 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 FAM74A3Q4VXF1 159 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 ASPHD2Q6ICH7 369 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 FAM166AQ6J272 317 aa5.2□□□□□ -1.58
ATPAF1-209ENST00000529214 RNASEKQ6P5S7 137 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms