RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 CFHR3Q02985 330 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 ZNF565Q8N9K5 539 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 OR52E5Q8NH55 327 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 OR9G1Q8NH87 305 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 CAPSLQ8WWF8 208 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 HIPK2Q9H2X6 1198 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 CCL28Q9NRJ3 127 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 TMEM14BQ9NUH8 114 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 OR14J1Q9UGF5 321 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 ARPC1BO15143 372 aaKnown RBP6.3□□□□□ -1.4
SORL1-207ENST00000528339 CD5LO43866 347 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 FOXH1O75593 365 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 MSMBP08118 114 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 USF1P22415 310 aaPredicted RBP6.3□□□□□ -1.4
SORL1-207ENST00000528339 DIAPH2-AS1Q14236 149 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 VMO1Q7Z5L0 202 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 TBC1D26Q86UD7 250 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 ZNF429Q86V71 674 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 FAM71E2Q8N5Q1 922 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 ZNF114Q8NC26 417 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 TMEM186Q96B77 213 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 PLEKHA2Q9HB19 425 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 DNAJB11Q9UBS4 358 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 CYSRT1A8MQ03 144 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 INMT-MINDY4F8WBC2 141 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 ZNF205O95201 554 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 AMY1AP04745 511 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 CEACAM6P40199 344 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 PAX9P55771 341 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 ID3Q02535 119 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 CHRFAM7AQ494W8 412 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 TPTE2P1Q5T6R2 138 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 CIARTQ8N365 385 aaPredicted RBP6.3□□□□□ -1.4
SORL1-207ENST00000528339 OR2AK2Q8NG84 335 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 TIMD4Q96H15 378 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 RNF126Q9BV68 326 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 CACNA1BQ00975 2339 aa6.3□□□□□ -1.4
SORL1-207ENST00000528339 DIDO1Q9BTC0 2240 aaKnown RBP6.3□□□□□ -1.4
SORL1-207ENST00000528339 hCG_1807616A0A1W2PRN6 198 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 NFYAP23511 347 aaPredicted RBP6.29□□□□□ -1.4
SORL1-207ENST00000528339 VWC2Q2TAL6 325 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 DHRS7BQ6IAN0 325 aaPredicted RBP6.29□□□□□ -1.4
SORL1-207ENST00000528339 TMEM65Q6PI78 240 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 RAB39BQ96DA2 213 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 VRK1Q99986 396 aaPredicted RBP6.29□□□□□ -1.4
SORL1-207ENST00000528339 REG4Q9BYZ8 158 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 TRAPPC2LQ9UL33 140 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 C3orf85A0A1B0GTC6 90 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 A1L4Q6 167 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 GIPP09681 153 aaPredicted RBP6.29□□□□□ -1.4
SORL1-207ENST00000528339 KIR2DS2P43631 304 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 Q6ZRM9 215 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 LINC01356Q8N9X3 169 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 DMBX1Q8NFW5 382 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 OR52B4Q8NGK2 314 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 OR4A5Q8NH83 315 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 ARL11Q969Q4 196 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 ARV1Q9H2C2 271 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 RAB29O14966 203 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 SPINT2O43291 252 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 RAMP3O60896 148 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 EGR2P11161 476 aaPredicted RBP6.29□□□□□ -1.4
SORL1-207ENST00000528339 FOSL1P15407 271 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 DNASE1P24855 282 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 LUMP51884 338 aaPredicted RBP6.29□□□□□ -1.4
SORL1-207ENST00000528339 CD300CQ08708 224 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 ARFRP1Q13795 201 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 Q5PR19 223 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 ASCC1Q8N9N2 400 aaKnown RBP6.29□□□□□ -1.4
SORL1-207ENST00000528339 TMEM170AQ8WVE7 144 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 OR51J1Q9H342 316 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 BET1LQ9NYM9 111 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 ZNRD1Q9P1U0 126 aa6.29□□□□□ -1.4
SORL1-207ENST00000528339 FOXA2Q9Y261 457 aaPredicted RBP6.29□□□□□ -1.4
SORL1-207ENST00000528339 SRRM4A7MD48 611 aaKnown RBP6.28□□□□□ -1.4
SORL1-207ENST00000528339 HSPB6O14558 160 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 OCMP0CE72 109 aaPredicted RBP6.28□□□□□ -1.4
SORL1-207ENST00000528339 CD1BP29016 333 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 GABRA2P47869 451 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 MADCAM1Q13477 382 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 FAM219AQ8IW50 185 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 CLEC7AQ9BXN2 247 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 HEXA-AS1Q9H8Q6 139 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 HSPB7Q9UBY9 170 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 MRPS7Q9Y2R9 242 aaKnown RBP6.28□□□□□ -1.4
SORL1-207ENST00000528339 MMP24Q9Y5R2 645 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 MPTX1A8MV57 137 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 SPDEFO95238 335 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 PIGPP57054 158 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 RELBQ01201 579 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 PDPNQ86YL7 162 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 CCDC107Q8WV48 283 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 SCGB3A2Q96PL1 93 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 SEC22CQ9BRL7 303 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 PARD6GQ9BYG4 376 aaPredicted RBP6.28□□□□□ -1.4
SORL1-207ENST00000528339 CENPXA8MT69 81 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 B4DSR2 109 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 H0YIZ8 118 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 THBS3P49746 956 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 ATP5J2P56134 94 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms