RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 VPREB3Q9UKI3 123 aa2.1□□□□□ -2.07
CSDE1-209ENST00000525132 SLC7A11Q9UPY5 501 aa2.1□□□□□ -2.07
CSDE1-209ENST00000525132 ZNF257Q9Y2Q1 563 aa2.1□□□□□ -2.07
CSDE1-209ENST00000525132 PCNX3Q9H6A9 2034 aa2.1□□□□□ -2.07
CSDE1-209ENST00000525132 SMIM26A0A096LP01 95 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 A0A0J9YXV3 536 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 KIR2DS1A0A191URI9 304 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 IGLL5B9A064 214 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 FTCDNL1E5RQL4 147 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 H0Y9J4 135 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 TNFRSF11BO00300 401 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 MPZL2O60487 215 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ATP5HO75947 161 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 DEXIO95424 95 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ATP6V1G2O95670 118 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ORM1P02763 201 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 BGLAPP02818 100 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 HSPB1P04792 205 aaKnown RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 CD3GP09693 182 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 LIMS3P0CW19 117 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 LIMS4P0CW20 117 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 CCL3P10147 92 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ZNF35P13682 527 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 MEOX2P50222 304 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 NDUFA8P51970 172 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ZNF138P52744 262 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 TMEM33P57088 247 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 MAGOHP61326 146 aaKnown RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 HERVK_113P61574 105 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 RHOAP61586 193 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 BASP1P80723 227 aaKnown RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 KIR2DS1Q14954 304 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 KIAA0040Q15053 153 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 RGNQ15493 299 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 OR1Q1Q15612 314 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 BCL2A1Q16548 175 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 PRSS8Q16651 343 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 TTLL9Q3SXZ7 439 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 TIMM23BQ5SRD1 257 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ATAD3CQ5T2N8 411 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 SYT6Q5T7P8 510 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 METTL21CQ5VZV1 264 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 PLET1Q6UQ28 207 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 FBXW12Q6X9E4 464 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ZNF440Q8IYI8 595 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 PGAM4Q8N0Y7 254 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 COX18Q8N8Q8 333 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 LFNGQ8NES3 379 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 OR8K1Q8NGG5 319 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 OR4C13Q8NGP0 309 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 OR2AE1Q8NHA4 323 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 RHOXF1Q8NHV9 184 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 CDC26Q8NHZ8 85 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 CPNE4Q96A23 557 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 PPWD1Q96BP3 646 aaKnown RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 SEH1LQ96EE3 360 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 GALNT14Q96FL9 552 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ZNF649Q9BS31 505 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 SLC25A2Q9BXI2 301 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 METTL8Q9H825 291 aaKnown RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 ABCB9Q9NP78 766 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 RRAGDQ9NQL2 400 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 TMEM100Q9NV29 134 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 C14orf105Q9NVL8 296 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 UVRAGQ9P2Y5 699 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 VAX2Q9UIW0 290 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 TFR2Q9UP52 801 aa2.09□□□□□ -2.07
CSDE1-209ENST00000525132 POLR3HQ9Y535 204 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-209ENST00000525132 IGHV3OR16-9A0A0B4J2B5 98 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 SMIM23A6NLE4 172 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 TMEM210A6NLX4 147 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 J3QT63 122 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 ATP8B1O43520 1251 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 SUPT7LO94864 414 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 SPNP16150 400 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 RCC1P18754 421 aaPredicted RBP2.08□□□□□ -2.08
CSDE1-209ENST00000525132 PVALBP20472 110 aaPredicted RBP2.08□□□□□ -2.08
CSDE1-209ENST00000525132 GABRR1P24046 479 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 HTR1DP28221 377 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 CDKN2CP42773 168 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 CDKN2DP55273 166 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 RAB38P57729 211 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 RAB25P57735 213 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 TAS2R46P59540 309 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 UBE2NP61088 152 aaKnown RBP2.08□□□□□ -2.08
CSDE1-209ENST00000525132 PRR3P79522 188 aaKnown RBP2.08□□□□□ -2.08
CSDE1-209ENST00000525132 MT1HP80294 61 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 UAP1Q16222 522 aaPredicted RBP2.08□□□□□ -2.08
CSDE1-209ENST00000525132 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 SLC36A2Q495M3 483 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 COX19Q49B96 90 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 TTC32Q5I0X7 151 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 SAPCD1Q5SSQ6 148 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 ARL9Q6T311 187 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 MYPOPQ86VE0 399 aaPredicted RBP2.08□□□□□ -2.08
CSDE1-209ENST00000525132 C10orf107Q8IVU9 208 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 CEND1Q8N111 149 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 GAPTQ8N292 157 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 STPG2Q8N412 459 aa2.08□□□□□ -2.08
CSDE1-209ENST00000525132 SPICQ8N5J4 248 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms