RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CGB3P0DN86 165 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 CGB7P0DN87 165 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 SLC2A2P11168 524 aaPredicted RBP4.28□□□□□ -1.72
SPTA1-209ENST00000498708 DBTP11182 482 aaKnown RBP4.28□□□□□ -1.72
SPTA1-209ENST00000498708 VDAC1P21796 283 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 CHRNA7P36544 502 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 CDKN1BP46527 198 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 SOX2P48431 317 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 MEOX2P50222 304 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 RAB7AP51149 207 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 CCR9P51686 369 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 CEBPGP53567 150 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 IFITM2Q01629 132 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 ALKBH1Q13686 389 aaKnown RBP4.28□□□□□ -1.72
SPTA1-209ENST00000498708 KIR2DS1Q14954 304 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 KISS1Q15726 138 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 SRSF7Q16629 238 aaKnown RBP eCLIP4.28□□□□□ -1.72
SPTA1-209ENST00000498708 PIGYQ3MUY2 71 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 ATAD3CQ5T2N8 411 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 DDI2Q5TDH0 399 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 ZNF691Q5VV52 312 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 RSBN1Q5VWQ0 802 aaPredicted RBP4.28□□□□□ -1.72
SPTA1-209ENST00000498708 KDM4DQ6B0I6 523 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 ZFP1Q6P2D0 407 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 LINC00299Q6ZSB3 139 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 COMMD1Q8N668 190 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 Q8N9W7 124 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 CHST4Q8NCG5 386 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 OR10V1Q8NGI7 309 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 OR51T1Q8NGJ9 327 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 OR2T10Q8NGZ9 312 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 CNIH3Q8TBE1 160 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 HAVCR2Q8TDQ0 301 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 NEK7Q8TDX7 302 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 TNFAIP8L1Q8WVP5 186 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 TSEN15Q8WW01 171 aaKnown RBP4.28□□□□□ -1.72
SPTA1-209ENST00000498708 ST8SIA2Q92186 375 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 ARL11Q969Q4 196 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 C10orf35Q96D05 121 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 C4orf36Q96KX1 117 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 MBOAT4Q96T53 435 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 C12orf57Q99622 126 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 BARHL1Q9BZE3 327 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 METTL9Q9H1A3 318 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 GNB4Q9HAV0 340 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 PCDHB16Q9NRJ7 776 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 FAM118AQ9NWS6 357 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 RSL24D1Q9UHA3 163 aaKnown RBP4.28□□□□□ -1.72
SPTA1-209ENST00000498708 WSB1Q9Y6I7 421 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 OR4C45A6NMZ5 311 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 NPIPB11E5RHQ5 1161 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 G3V318 75 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 SDCBPO00560 298 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 LDLRAD4O15165 306 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 MPZL2O60487 215 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 NDUFS6O75380 124 aaKnown RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 SAP30O75446 220 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 GPX5O75715 221 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 OR7C1O76099 320 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 CDRT1O95170 752 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 SPDEFO95238 335 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 IFNA4P05014 189 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 CSN2P05814 226 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 CRYGCP07315 174 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 ELANEP08246 267 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 SERPINA2P20848 420 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 FASP25445 335 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 CD1BP29016 333 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 SLC6A1P30531 599 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 TAGLN2P37802 199 aaKnown RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 RPL5P46777 297 aaKnown RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 OR3A3P47888 321 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 CDX1P47902 265 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 MTNR1BP49286 362 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 RASSF2P50749 326 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 F2RL1P55085 397 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 ZP1P60852 638 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 ISL1P61371 349 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 ZNF816Q0VGE8 651 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 RSU1Q15404 277 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 USF2Q15853 346 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 ATP6AP1Q15904 470 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 ZIK1Q3SY52 487 aaPredicted RBP4.27□□□□□ -1.73
SPTA1-209ENST00000498708 PXDC1Q5TGL8 231 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 C5orf24Q7Z6I8 188 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 HAPLN4Q86UW8 402 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 TGIF2LXQ8IUE1 241 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 SUMF2Q8NBJ7 301 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 OR51A2Q8NGJ7 313 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 OR8J1Q8NGP2 316 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 OR1N2Q8NGR9 330 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 CASTOR1Q8WTX7 329 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 UFD1Q92890 307 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 ORAI1Q96D31 301 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 PELI1Q96FA3 418 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 CYYR1Q96J86 154 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 KCTD7Q96MP8 289 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 S1PR3Q99500 378 aa4.27□□□□□ -1.73
SPTA1-209ENST00000498708 PDCD1LG2Q9BQ51 273 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms