RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CT45A6P0DMU7 189 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 CT45A5P0DMU8 189 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 CT45A7P0DMV0 189 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 MYL12AP19105 171 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 MED21Q13503 144 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 PSG5Q15238 335 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 XAF1Q6GPH4 301 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 SIGIRRQ6IA17 410 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 LINC00322Q6ZN03 302 aaPredicted RBP8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 MOB1BQ7L9L4 216 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 USMG5Q96IX5 58 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 SULT4A1Q9BR01 284 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 FAM103A1Q9BTL3 118 aaKnown RBP8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 HIPK2Q9H2X6 1198 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 ZNF355PQ9NSJ1 428 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 PEMTQ9UBM1 199 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 AASSQ9UDR5 926 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 ALMS1Q8TCU4 4167 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 TRAV8-7A0A075B6U6 113 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 ST8SIA5O15466 376 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 TPPPO94811 219 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 OR2A4O95047 310 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 CPEP16870 476 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 AQP4P55087 323 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 FXYD3Q14802 87 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 IL34Q6ZMJ4 242 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 PDPNQ86YL7 162 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 PACRGLQ8N7B6 248 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 IL1F10Q8WWZ1 152 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 NEDD4LQ96PU5 975 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 RIMS4Q9H426 269 aaPredicted RBP8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 BANF2Q9H503 90 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 SLC2A8Q9NY64 477 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 PEF1Q9UBV8 284 aaKnown RBP8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 RAB26Q9ULW5 256 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 MGAT4AQ9UM21 535 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 GAB2Q9UQC2 676 aa8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 EXOSC1Q9Y3B2 195 aaKnown RBP8.37□□□□□ -1.07
SNRNP200-207ENST00000493271 TRBV5-7A0A0A0MS05 114 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 LOC100130705A0A1B0GUX0 176 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 APOA2P02652 100 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 CSN3P07498 182 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 ZBTB25P24278 435 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 LGALS7P47929 136 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 ETV1P50549 477 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 SYNJ2BPP57105 145 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 TAS2R43P59537 309 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 RPS11P62280 158 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 RPEL1Q2QD12 228 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 RPL39P5Q59GN2 51 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 OR2G6Q5TZ20 316 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 RNLSQ5VYX0 342 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 ZNF343Q6P1L6 599 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 CBR4Q8N4T8 237 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 SVOPQ8N4V2 548 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 GRPEL2Q8TAA5 225 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 ORAI1Q96D31 301 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 CLCC1Q96S66 551 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 SLC29A1Q99808 456 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 C9orf16Q9BUW7 83 aa8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 TINAGL1Q9GZM7 467 aaPredicted RBP8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 DIMT1Q9UNQ2 313 aaKnown RBP8.36□□□□□ -1.07
SNRNP200-207ENST00000493271 A0A0B4J203 849 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 CNIH1O95406 144 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 NAPSAO96009 420 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 MAPK3P27361 379 aaPredicted RBP8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 MECP2P51608 486 aaKnown RBP8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 CD81P60033 236 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 RPS16P62249 146 aaKnown RBP8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 FAM209BQ5JX69 171 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 ZNF880Q6PDB4 577 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 GLDNQ6ZMI3 551 aaPredicted RBP8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 OR13C5Q8NGS8 318 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 APH1BQ8WW43 257 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 LINC00476Q8WZB0 136 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 SNAPC3Q92966 411 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 PTX4Q96A99 478 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 PGLYRP3Q96LB9 341 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 NEURL2Q9BR09 285 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 ZNF221Q9UK13 617 aa8.35□□□□□ -1.07
SNRNP200-207ENST00000493271 TRBV6-6A0A0A6YYG2 114 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 ANKRD34BA5PLL1 514 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 CD1AP06126 327 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 TAGLNQ01995 201 aaKnown RBP8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 TTC23Q5W5X9 447 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 BVESQ8NE79 360 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 OR5T1Q8NG75 326 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 FAM46BQ96A09 425 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 ABHD14BQ96IU4 210 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 DERL3Q96Q80 235 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 CHMP1AQ9HD42 196 aaPredicted RBP8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 TNCP24821 2201 aa8.34□□□□□ -1.07
SNRNP200-207ENST00000493271 DENRO43583 198 aaKnown RBP8.33□□□□□ -1.08
SNRNP200-207ENST00000493271 LALBAP00709 142 aa8.33□□□□□ -1.08
SNRNP200-207ENST00000493271 IGKV1-16P04430 117 aa8.33□□□□□ -1.08
SNRNP200-207ENST00000493271 CEACAM6P40199 344 aa8.33□□□□□ -1.08
SNRNP200-207ENST00000493271 RPS27AP62979 156 aaKnown RBP8.33□□□□□ -1.08
SNRNP200-207ENST00000493271 CBX3Q13185 183 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms