RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 A0A1W2PRS3 328 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 WIPF3A6NGB9 483 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 SLC17A3O00476 420 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 NGFP01138 241 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 SHISA5Q8N114 240 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 RNF166Q96A37 237 aaPredicted RBP9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 TPPP3Q9BW30 176 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 NUDT3O95989 172 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 CA6P23280 308 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 NHLH1Q02575 133 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 OR1L3Q8NH93 324 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 YTHDF2Q9Y5A9 579 aaKnown RBP9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 ZNF207O43670 478 aaKnown RBP9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 RHBDL1O75783 438 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 ARL3P36405 182 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 KCNMB1Q16558 191 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 TRAT1Q6PIZ9 186 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 OR2Y1Q8NGV0 311 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 BADQ92934 168 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 ZNF385AQ96PM9 386 aaKnown RBP9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 IL19Q9UHD0 177 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 PAPPA2Q9BXP8 1791 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 PIAS2O75928 621 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 ATP5G3P48201 142 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 PLP1P60201 277 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 FA2HQ7L5A8 372 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 AGMATQ9BSE5 352 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 TCFL5Q9UL49 500 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 ANAPC10Q9UM13 185 aa9.68□□□□□ -0.86
CRNKL1-204ENST00000490910 TRAV9-1A0A075B6T8 112 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 TMEM30CPA0ZSE6 113 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A10PA6NDY2 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A18PA6NE21 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A16PA6NEW6 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A20PA6NIJ5 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A8PA6NJQ4 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A7PA6NKC0 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A22PA8MWA6 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A12PA8MX19 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A5PA8MXJ8 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A23PA8MXZ1 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A15PP0C7V4 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A13PP0C7W8 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A14PP0C7W9 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A24PP0C7X0 464 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM27BQ5VT28 67 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 NUDT10Q8NFP7 164 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 OR2T6Q8NHC8 308 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 ZNF296Q8WUU4 475 aaPredicted RBP9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 OR2V2Q96R30 315 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 S1PR3Q99500 378 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 PEF1Q9UBV8 284 aaKnown RBP9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 ARL14EPLP0DKL9 152 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 CCL1P22362 96 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FGF12P61328 243 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 MAJINQ3KP22 176 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 RPS19BP1Q86WX3 136 aaKnown RBP9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM19A2Q8N3H0 131 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 LRFN3Q9BTN0 628 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 FCGR3BO75015 233 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 MPDU1O75352 247 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 NAPSAO96009 420 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 C1orf174Q8IYL3 243 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 KCNS1Q96KK3 526 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 PXMP4Q9Y6I8 212 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 SPINK2P20155 84 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 COL9A1P20849 921 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 PPOXP50336 477 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 RSPO4Q2I0M5 234 aaPredicted RBP9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 IBA57Q5T440 356 aaKnown RBP9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 RTN4RQ9BZR6 473 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 OR1A1Q9P1Q5 309 aa9.67□□□□□ -0.86
CRNKL1-204ENST00000490910 CIDEAO60543 219 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 IGKV3-11P04433 115 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 AMY1AP04745 511 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 NPBWR2P48146 333 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 DSCR4P56555 118 aaPredicted RBP9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 RPL31P62899 125 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 FOXL1Q12952 345 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 FXYD3Q14802 87 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 COA6Q5JTJ3 125 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 CDCP2Q5VXM1 449 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 ZNF324BQ6AW86 544 aaPredicted RBP9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 RHBDD2Q6NTF9 364 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 VWA1Q6PCB0 445 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 SCARF2Q96GP6 870 aaPredicted RBP9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 UCN2Q96RP3 112 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 HSD17B10Q99714 261 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 TECRQ9NZ01 308 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 SHANK1Q9Y566 2161 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 PGPEP1LA6NFU8 196 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 Q8IYB0 196 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 GATAD1Q8WUU5 269 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 KLHDC3Q9BQ90 382 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 A0A1B0GUS0 222 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 LINC00869P0C866 280 aa9.66□□□□□ -0.86
CRNKL1-204ENST00000490910 SELENOTP62341 195 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms