RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 LYSTQ99698 3801 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 TRBV5-5A0A0J9YX44 114 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 C13orf42A0A1B0GVH6 325 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 TMEM189A5PLL7 270 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 MAGEA13PA6NCF6 341 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 INS-IGF2F8WCM5 200 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 EBAG9O00559 213 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 XRCC3O43542 346 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 CNIH1O95406 144 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 FADS2O95864 444 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 CD74P04233 296 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 CRYGCP07315 174 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 CSN3P07498 182 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 MYOD1P15172 320 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 CCL3L1P16619 93 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 COX7A1P24310 79 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 PSMA1P25786 263 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 MAPK3P27361 379 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 NUP62P37198 522 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 POU3F4P49335 361 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 ARFRP1Q13795 201 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 HNF4GQ14541 408 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 ATP6AP1Q15904 470 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 LY6EQ16553 131 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 POU2AF1Q16633 256 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 SMN1Q16637 294 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 CST9LP1Q5W188 147 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 CORO6Q6QEF8 472 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 TBPL2Q6SJ96 375 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 IL34Q6ZMJ4 242 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 RBPMS2Q6ZRY4 209 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 VTCN1Q7Z7D3 282 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 SLC38A6Q8IZM9 456 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 TTC9CQ8N5M4 171 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 UXS1Q8NBZ7 420 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 ZNRF1Q8ND25 227 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 OR9G4Q8NGQ1 327 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 OR2AE1Q8NHA4 323 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 SETD6Q8TBK2 473 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 VN1R17PQ8TDU5 208 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 TMEM170AQ8WVE7 144 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 C22orf15Q8WYQ4 148 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 SLC7A6Q92536 515 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 RORBQ92753 470 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 STMN2Q93045 179 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 DUX5Q96PT3 197 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 MAP6D1Q9H9H5 199 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 CENPMQ9NSP4 180 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 ZNF319Q9P2F9 582 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 WASHC3Q9Y3C0 194 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 DNAH11Q96DT5 4516 aa2.06□□□□□ -2.08
DEPDC1-203ENST00000488146 TACC2O95359 2948 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 TRBV7-1A0A0A6YYK4 115 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 IGHV7-81A0A0B4J1V7 117 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 TMEM272A0A1B0GTI8 110 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 A0A1B0GVY2 172 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 LOC107986453A0A1B0GWG9 222 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 hDV102S1A0JD36 115 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 K7EP13 123 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 RAB29O14966 203 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 RBFOX2O43251 390 aaKnown RBP eCLIP2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 ATP5HO75947 161 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 MT-ND4P03905 459 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 SCTP09683 121 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 IGHV4-30-4P0DP06 118 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 SRMP19623 302 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 CALB2P22676 271 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 GNRHRP30968 328 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 HOXD3P31249 432 aaPredicted RBP2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 OR1E2P47887 323 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 PRKXP51817 358 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 GBX2P52951 348 aaPredicted RBP2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 KRTAP10-2P60368 255 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 UBE2KP61086 200 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 BLCAPP62952 87 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 GINS1Q14691 196 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 HAGHQ16775 308 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 RNF212Q495C1 297 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 ABCA11PQ4W5N1 156 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 KDM4DQ6B0I6 523 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 SPSB3Q6PJ21 355 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 CCDC121Q6ZUS5 278 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 SBSPONQ8IVN8 264 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 GVQW1Q8N7I0 195 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 OR10X1Q8NGY0 326 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 OR52N1Q8NH53 320 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 VSTM2AQ8TAG5 236 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 SNAPC3Q92966 411 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 GALNT14Q96FL9 552 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 PECRQ9BY49 303 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 CHMP1AQ9HD42 196 aaPredicted RBP2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 SIGLEC9Q9Y336 463 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 UFC1Q9Y3C8 167 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 A0A1B0GW55 424 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 A0A1W2PPQ1 181 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 OR4C45A6NMZ5 311 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 MRPS14O60783 128 aaKnown RBP2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 DHFRP00374 187 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 TFAP2AP05549 437 aa2.05□□□□□ -2.08
DEPDC1-203ENST00000488146 CD2P06729 351 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms