RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 WFDC10AQ9H1F0 79 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 BANF2Q9H503 90 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 FAM53CQ9NYF3 392 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 ADAM30Q9UKF2 790 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 CAPGP40121 348 aa12.15□□□□□ -0.46
DDX56-210ENST00000479440 MECP2P51608 486 aaKnown RBP12.15□□□□□ -0.46
DDX56-210ENST00000479440 CD300EQ496F6 205 aaPredicted RBP12.15□□□□□ -0.46
DDX56-210ENST00000479440 C5orf24Q7Z6I8 188 aa12.15□□□□□ -0.46
DDX56-210ENST00000479440 PDPNQ86YL7 162 aa12.15□□□□□ -0.46
DDX56-210ENST00000479440 SNAPC3Q92966 411 aa12.15□□□□□ -0.46
DDX56-210ENST00000479440 SMIM19Q96E16 107 aa12.15□□□□□ -0.46
DDX56-210ENST00000479440 Q96MT0 163 aa12.15□□□□□ -0.46
DDX56-210ENST00000479440 OR14A2Q96R54 314 aa12.15□□□□□ -0.46
DDX56-210ENST00000479440 TNCP24821 2201 aa12.15□□□□□ -0.46
DDX56-210ENST00000479440 TRBV12-3P01733 135 aa12.14□□□□□ -0.47
DDX56-210ENST00000479440 APOA2P02652 100 aa12.14□□□□□ -0.47
DDX56-210ENST00000479440 RPS16P62249 146 aaKnown RBP12.14□□□□□ -0.47
DDX56-210ENST00000479440 DEFA5Q01523 94 aa12.14□□□□□ -0.47
DDX56-210ENST00000479440 DYRK1AQ13627 763 aa12.14□□□□□ -0.47
DDX56-210ENST00000479440 OR52I1Q8NGK6 324 aa12.14□□□□□ -0.47
DDX56-210ENST00000479440 SLC7A6OSQ96CW6 309 aaPredicted RBP12.14□□□□□ -0.47
DDX56-210ENST00000479440 ORAI1Q96D31 301 aa12.14□□□□□ -0.47
DDX56-210ENST00000479440 SULT4A1Q9BR01 284 aa12.14□□□□□ -0.47
DDX56-210ENST00000479440 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
DDX56-210ENST00000479440 KLK5Q9Y337 293 aaPredicted RBP12.14□□□□□ -0.47
DDX56-210ENST00000479440 H3BNX3 289 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 ITGB1BP1O14713 200 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 BAG2O95816 211 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 IGKV1-16P04430 117 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 GUCA2BQ16661 112 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 XAF1Q6GPH4 301 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 SIGIRRQ6IA17 410 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 SLC16A13Q7RTY0 426 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 RPP25LQ8N5L8 163 aaKnown RBP12.13□□□□□ -0.47
DDX56-210ENST00000479440 OR13C5Q8NGS8 318 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 ABHD14BQ96IU4 210 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 NEDD4LQ96PU5 975 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 AASSQ9UDR5 926 aa12.13□□□□□ -0.47
DDX56-210ENST00000479440 RPL36Q9Y3U8 105 aaKnown RBP12.13□□□□□ -0.47
DDX56-210ENST00000479440 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 NDUFB8O95169 186 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 ALPLP05186 524 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 GABRB1P18505 474 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 Q499Y3 187 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 CEMP1Q6PRD7 247 aaPredicted RBP12.12□□□□□ -0.47
DDX56-210ENST00000479440 TMPRSS11AQ6ZMR5 421 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 CDH26Q8IXH8 852 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 SVOPQ8N4V2 548 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 CHMP1AQ9HD42 196 aaPredicted RBP12.12□□□□□ -0.47
DDX56-210ENST00000479440 AMBNQ9NP70 447 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 ZC4H2Q9NQZ6 224 aa12.12□□□□□ -0.47
DDX56-210ENST00000479440 TRAV8-7A0A075B6U6 113 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 ZNF785A8K8V0 405 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 EI24O14681 340 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 LIMS3P0CW19 117 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 LIMS4P0CW20 117 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 SNRPBP14678 240 aaKnown RBP12.11□□□□□ -0.47
DDX56-210ENST00000479440 ZIK1Q3SY52 487 aaPredicted RBP12.11□□□□□ -0.47
DDX56-210ENST00000479440 YIF1BQ5BJH7 314 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 CYYR1Q96J86 154 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 PHB2Q99623 299 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 OVOL2Q9BRP0 275 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 MRPS18AQ9NVS2 196 aaKnown RBP12.11□□□□□ -0.47
DDX56-210ENST00000479440 GHRLQ9UBU3 117 aa12.11□□□□□ -0.47
DDX56-210ENST00000479440 SSBP2P81877 361 aaPredicted RBP12.1□□□□□ -0.47
DDX56-210ENST00000479440 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
DDX56-210ENST00000479440 DEFB114Q30KQ6 69 aa12.1□□□□□ -0.47
DDX56-210ENST00000479440 C1orf146Q5VVC0 180 aa12.1□□□□□ -0.47
DDX56-210ENST00000479440 NKAIN3Q8N8D7 197 aa12.1□□□□□ -0.47
DDX56-210ENST00000479440 DRAXINQ8NBI3 349 aaPredicted RBP12.1□□□□□ -0.47
DDX56-210ENST00000479440 SETD6Q8TBK2 473 aa12.1□□□□□ -0.47
DDX56-210ENST00000479440 GATAD1Q8WUU5 269 aa12.1□□□□□ -0.47
DDX56-210ENST00000479440 FAM46BQ96A09 425 aa12.1□□□□□ -0.47
DDX56-210ENST00000479440 AGMATQ9BSE5 352 aa12.1□□□□□ -0.47
DDX56-210ENST00000479440 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
DDX56-210ENST00000479440 TECRQ9NZ01 308 aaKnown RBP12.1□□□□□ -0.47
DDX56-210ENST00000479440 KMT2AQ03164 3969 aa12.1□□□□□ -0.47
DDX56-210ENST00000479440 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
DDX56-210ENST00000479440 A0A0J9YWU9 116 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 BMPR1BO00238 502 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 OGG1O15527 345 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 TUSC2O75896 110 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 CBX3Q13185 183 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 FAM209BQ5JX69 171 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 THRSPQ92748 146 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 SLC35D1Q9NTN3 355 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 ZNF221Q9UK13 617 aa12.09□□□□□ -0.47
DDX56-210ENST00000479440 HECTD4Q9Y4D8 3996 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 DEDDO75618 318 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 ZBTB25P24278 435 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 HLA-DRB3P79483 266 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 TNFRSF9Q07011 255 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 OR2G6Q5TZ20 316 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 ZNF880Q6PDB4 577 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms