RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SSX3Q99909 188 aa7.33□□□□□ -1.24
SMC4-213ENST00000472282 NXF2Q9GZY0 626 aaKnown RBP7.33□□□□□ -1.24
SMC4-213ENST00000472282 MEGF9Q9H1U4 602 aa7.33□□□□□ -1.24
SMC4-213ENST00000472282 IFT46Q9NQC8 304 aa7.33□□□□□ -1.24
SMC4-213ENST00000472282 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
SMC4-213ENST00000472282 PLXNB1O43157 2135 aa7.33□□□□□ -1.24
SMC4-213ENST00000472282 BTBD17A6NE02 478 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 LY6LH3BQJ8 138 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 HSD17B6O14756 317 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 CHST1O43916 411 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 PRSS3P35030 304 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 CBX5P45973 191 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 REG1BP48304 166 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 RNASE12Q5GAN4 147 aaKnown RBP7.32□□□□□ -1.24
SMC4-213ENST00000472282 LY6G6FQ5SQ64 297 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 HOGA1Q86XE5 327 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 LYG1Q8N1E2 194 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 PIFOQ8TCI5 191 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 DGCR14Q96DF8 476 aaKnown RBP7.32□□□□□ -1.24
SMC4-213ENST00000472282 DIRAS2Q96HU8 199 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 GINS4Q9BRT9 223 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 IFI27L2Q9H2X8 130 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 ABCB10Q9NRK6 738 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 RDH8Q9NYR8 311 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 ANXA10Q9UJ72 324 aa7.32□□□□□ -1.24
SMC4-213ENST00000472282 TRBV6-7A0A0A0MS04 114 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 A0A1W2PPI3 338 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 VGLL3A8MV65 326 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 DIRAS3O95661 229 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 LPLP06858 475 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 MED14OSP0DP75 135 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 CEACAM6P40199 344 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 RAB13P51153 203 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 ARHGDIBP52566 201 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 ARPC4P59998 168 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 ZNF816Q0VGE8 651 aaPredicted RBP7.31□□□□□ -1.24
SMC4-213ENST00000472282 AANATQ16613 207 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 PDLIM3Q53GG5 364 aaPredicted RBP7.31□□□□□ -1.24
SMC4-213ENST00000472282 CCDC144NLQ6NUI1 221 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 ODF3L1Q8IXM7 274 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 OR5R1Q8NH85 324 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 OR10J5Q8NHC4 309 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 GPX8Q8TED1 209 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 SNAPC3Q92966 411 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 ABHD14BQ96IU4 210 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 TOLLIPQ9H0E2 274 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 C11orf54Q9H0W9 315 aaPredicted RBP7.31□□□□□ -1.24
SMC4-213ENST00000472282 MMP27Q9H306 513 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 ANAPC10Q9UM13 185 aa7.31□□□□□ -1.24
SMC4-213ENST00000472282 SAA2-SAA4A0A096LPE2 208 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 OOSP1A8MZH6 123 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 M0QZ24 198 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 ITGB1BP1O14713 200 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 TIMM23O14925 209 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 GAPDHP04406 335 aaKnown RBP7.3□□□□□ -1.24
SMC4-213ENST00000472282 CTXN2P0C2S0 81 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 SAA2P0DJI9 122 aaPredicted RBP7.3□□□□□ -1.24
SMC4-213ENST00000472282 CD24P25063 80 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 BRS3P32247 399 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 TNFSF8P32971 234 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 OR3A3P47888 321 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 RAB7AP51149 207 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 DYNLT3P51808 116 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 ZNF137PP52743 207 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 IL18Q14116 193 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 HABP2Q14520 560 aaPredicted RBP7.3□□□□□ -1.24
SMC4-213ENST00000472282 CCBE1Q6UXH8 406 aaPredicted RBP7.3□□□□□ -1.24
SMC4-213ENST00000472282 MOB3BQ86TA1 216 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 TGIF2LXQ8IUE1 241 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 H1FOOQ8IZA3 346 aaPredicted RBP7.3□□□□□ -1.24
SMC4-213ENST00000472282 OR8H3Q8N146 312 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 DRAM1Q8N682 238 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 C11orf44Q8N8P7 122 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 OR52I2Q8NH67 350 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 OR56B4Q8NH76 319 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 RTN4IP1Q8WWV3 396 aaPredicted RBP7.3□□□□□ -1.24
SMC4-213ENST00000472282 CFHR4Q92496 578 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 ST6GALNAC6Q969X2 333 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 ABHD1Q96SE0 405 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 OR2D2Q9H210 308 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 SCPEP1Q9HB40 452 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 RNF150Q9ULK6 438 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 TCF19Q9Y242 345 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 A3GALT2U3KPV4 340 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 MEGF8Q7Z7M0 2845 aa7.3□□□□□ -1.24
SMC4-213ENST00000472282 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 IGHV1-3A0A0C4DH29 117 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 J3QRK9 145 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 SULT1C2O00338 296 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 TXNL1O43396 289 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 LANCL1O43813 399 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 TPPPO94811 219 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 NAT1P18440 290 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 NFYAP23511 347 aaPredicted RBP7.29□□□□□ -1.24
SMC4-213ENST00000472282 S100A5P33763 92 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 RCVRNP35243 200 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 DGCR2P98153 550 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 CDK10Q15131 360 aa7.29□□□□□ -1.24
SMC4-213ENST00000472282 RPL39P5Q59GN2 51 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms