RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TPSG1Q9NRR2 321 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 SCN3BQ9NY72 215 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 FOXA2Q9Y261 457 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-210ENST00000469897 WASHC3Q9Y3C0 194 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 IGHV4OR15-8A0A075B7B6 117 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 A0A087WW49 117 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 TRBV6-6A0A0A6YYG2 114 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 OR5H14A6NHG9 310 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 ANKRD65E5RJM6 399 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 HSPA12AO43301 675 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 IGHV3-11P01762 117 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 HSMCR30P0CW71 290 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 SPNP16150 400 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 CRIP2P52943 208 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-210ENST00000469897 UNQ5815/PRO19632Q6UWF5 114 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 ZNF562Q6V9R5 426 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 TMEM91Q6ZNR0 172 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 SBSPONQ8IVN8 264 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 LFNGQ8NES3 379 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 RNF5Q99942 180 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 URM1Q9BTM9 101 aaKnown RBP10.26□□□□□ -0.77
CPSF4-210ENST00000469897 PLGRKTQ9HBL7 147 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 Q9N2K0 584 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 ISYNA1Q9NPH2 558 aa10.26□□□□□ -0.77
CPSF4-210ENST00000469897 METTL1Q9UBP6 276 aaKnown RBP10.26□□□□□ -0.77
CPSF4-210ENST00000469897 FOXI3A8MTJ6 420 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-210ENST00000469897 ITGB1BP1O14713 200 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 VEGFCP49767 419 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 CLDN12P56749 244 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 RPS16P62249 146 aaKnown RBP10.25□□□□□ -0.77
CPSF4-210ENST00000469897 RPS25P62851 125 aaKnown RBP10.25□□□□□ -0.77
CPSF4-210ENST00000469897 HLA-DRB3P79483 266 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 IRF3Q14653 427 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 AKIRIN2Q53H80 203 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 ACTBL2Q562R1 376 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 CD200R1LQ6Q8B3 271 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 MOB1BQ7L9L4 216 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 OVCH2Q7RTZ1 564 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 TCTEX1D1Q8N7M0 179 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 ZNF383Q8NA42 475 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 EDARADDQ8WWZ3 215 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 UFD1Q92890 307 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 ARHGAP5-AS1Q96IT6 56 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 RHOVQ96L33 236 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 VCXQ9H320 206 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 HSF4Q9ULV5 492 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 TENM3Q9P273 2699 aa10.25□□□□□ -0.77
CPSF4-210ENST00000469897 IGKV1-6A0A0C4DH72 117 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 SLC17A2O00624 439 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 RBBP9O75884 186 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 CA2P00918 260 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 IGKV1-16P04430 117 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 HSPB1P04792 205 aaKnown RBP10.24□□□□□ -0.77
CPSF4-210ENST00000469897 LGALS1P09382 135 aaKnown RBP10.24□□□□□ -0.77
CPSF4-210ENST00000469897 CPEP16870 476 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 CD40LGP29965 261 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 TPBGQ13641 420 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 RAB11BQ15907 218 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 C2orf76Q3KRA6 126 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 ACSM6Q6P461 480 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 ARPC1AQ92747 370 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 PTX4Q96A99 478 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 CMSS1Q9BQ75 279 aaKnown RBP10.24□□□□□ -0.77
CPSF4-210ENST00000469897 PECRQ9BY49 303 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 NKX1-2Q9UD57 310 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-210ENST00000469897 ZNF221Q9UK13 617 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 TPRKBQ9Y3C4 175 aa10.24□□□□□ -0.77
CPSF4-210ENST00000469897 RYR3Q15413 4870 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 TRDCB7Z8K6 153 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 GP9P14770 177 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 TPPP2P59282 170 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 PLA2G7Q13093 441 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 PLAC9Q5JTB6 97 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 OR5T1Q8NG75 326 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 FLYWCH2Q96CP2 140 aaKnown RBP10.23□□□□□ -0.77
CPSF4-210ENST00000469897 DUSP21Q9H596 190 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 C12orf4Q9NQ89 552 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 ZNF355PQ9NSJ1 428 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 RDH8Q9NYR8 311 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 MGAT4AQ9UM21 535 aa10.23□□□□□ -0.77
CPSF4-210ENST00000469897 TRIM64CA6NLI5 447 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 M0R1X1 148 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 ARPC1BO15143 372 aaKnown RBP10.22□□□□□ -0.77
CPSF4-210ENST00000469897 DENRO43583 198 aaKnown RBP10.22□□□□□ -0.77
CPSF4-210ENST00000469897 SLC25A17O43808 307 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 ARL6IP5O75915 188 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 TRGV3P03979 118 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 TFAP2AP05549 437 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 CD3GP09693 182 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 FABP5Q01469 135 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 PJVKQ0ZLH3 352 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 FXYD3Q14802 87 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 HAPLN4Q86UW8 402 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 GRPEL2Q8TAA5 225 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 FAM3DQ96BQ1 224 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 OR4C12Q96R67 309 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 TSNAXQ99598 290 aaKnown RBP10.22□□□□□ -0.77
CPSF4-210ENST00000469897 CCDC90BQ9GZT6 254 aa10.22□□□□□ -0.77
CPSF4-210ENST00000469897 C3orf84H3BNL1 204 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms