RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 GADD45AP24522 165 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 PPIFP30405 207 aaKnown RBP14.79□□□□□ -0.04
COL5A1-203ENST00000460264 MC5RP33032 325 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 KRTAP10-11P60412 298 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 MRPS15P82914 257 aaKnown RBP14.79□□□□□ -0.04
COL5A1-203ENST00000460264 EGFEM1PQ0D2K5 195 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 DEFB136Q30KP8 78 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 LIN54Q6MZP7 749 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 OR4A4PQ8NGN8 299 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 MYOZ3Q8TDC0 251 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 YTHDF1Q9BYJ9 559 aaKnown RBP14.79□□□□□ -0.04
COL5A1-203ENST00000460264 RDH8Q9NYR8 311 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 WSB1Q9Y6I7 421 aa14.79□□□□□ -0.04
COL5A1-203ENST00000460264 SMIM30A4D0T7 59 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 H7C2Y5 167 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 RRHO14718 337 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 FABP7O15540 132 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 HIST1H1DP16402 221 aaKnown RBP14.78□□□□□ -0.04
COL5A1-203ENST00000460264 HOXD3P31249 432 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-203ENST00000460264 FGF9P31371 208 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-203ENST00000460264 SERPINB10P48595 397 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 NDPQ00604 133 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 KIR2DS1Q14954 304 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 DRAXINQ8NBI3 349 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-203ENST00000460264 OR8U1Q8NH10 309 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 C4orf3Q8WVX3 66 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 CABLES2Q9BTV7 478 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 MCRIP2Q9BUT9 160 aaKnown RBP14.78□□□□□ -0.04
COL5A1-203ENST00000460264 FBXL15Q9H469 300 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 TXNL4BQ9NX01 149 aaKnown RBP14.78□□□□□ -0.04
COL5A1-203ENST00000460264 ZNF221Q9UK13 617 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 RNF150Q9ULK6 438 aa14.78□□□□□ -0.04
COL5A1-203ENST00000460264 A0A075B6Q4 140 aa14.77□□□□□ -0.05
COL5A1-203ENST00000460264 TRAV41A0A0B4J266 112 aa14.77□□□□□ -0.05
COL5A1-203ENST00000460264 RBBP9O75884 186 aa14.77□□□□□ -0.05
COL5A1-203ENST00000460264 GSTP1P09211 210 aaKnown RBP14.77□□□□□ -0.05
COL5A1-203ENST00000460264 ZNF773Q6PK81 442 aa14.77□□□□□ -0.05
COL5A1-203ENST00000460264 DPF1Q92782 380 aa14.77□□□□□ -0.05
COL5A1-203ENST00000460264 TOLLIPQ9H0E2 274 aa14.77□□□□□ -0.05
COL5A1-203ENST00000460264 STUB1Q9UNE7 303 aa14.77□□□□□ -0.05
COL5A1-203ENST00000460264 METTL21EPA6NDL7 271 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 K7EIL1 84 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 BET1O15155 118 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 IGLV1-40P01703 118 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 RAB25P57735 213 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 C19orf54Q5BKX5 351 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 IGSF11Q5DX21 431 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 ZNF383Q8NA42 475 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 MAFIPQ8WZ33 124 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 KLK15Q9H2R5 256 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 ZNF230Q9UIE0 474 aaPredicted RBP14.76□□□□□ -0.05
COL5A1-203ENST00000460264 FBXO7Q9Y3I1 522 aa14.76□□□□□ -0.05
COL5A1-203ENST00000460264 NOTOA8MTQ0 251 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 DIRAS3O95661 229 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 IGKV1-16P04430 117 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 TFAP2AP05549 437 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 GSTT2P0CG29 244 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 GSTT2BP0CG30 244 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 CRIP2P52943 208 aaPredicted RBP14.75□□□□□ -0.05
COL5A1-203ENST00000460264 LINC00205P59089 165 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 CX3CL1P78423 397 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 PLGLAQ15195 96 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 ZNF660Q6AZW8 331 aaPredicted RBP14.75□□□□□ -0.05
COL5A1-203ENST00000460264 MINDY2Q8NBR6 621 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.75□□□□□ -0.05
COL5A1-203ENST00000460264 RNF5Q99942 180 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 ATG5Q9H1Y0 275 aa14.75□□□□□ -0.05
COL5A1-203ENST00000460264 TRBV6-7A0A0A0MS04 114 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 WI2-2373I1.2A0A1W2PRP0 233 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 M0R1X1 148 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 FCN1O00602 326 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 FHL3Q13643 280 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 ARFRP1Q13795 201 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 KIAA0141Q14154 515 aaPredicted RBP14.74□□□□□ -0.05
COL5A1-203ENST00000460264 ECSCRQ19T08 205 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 TMEM65Q6PI78 240 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 TPRA1Q86W33 373 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 PDPNQ86YL7 162 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 OR10J5Q8NHC4 309 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 UBE2E2Q96LR5 201 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 OR2D2Q9H210 308 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL5A1-203ENST00000460264 SSR3Q9UNL2 185 aa14.74□□□□□ -0.05
COL5A1-203ENST00000460264 APOA2P02652 100 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 OR8U9P0C7N5 309 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 SNRPBP14678 240 aaKnown RBP14.73□□□□□ -0.05
COL5A1-203ENST00000460264 PSG5Q15238 335 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 SRSF7Q16629 238 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL5A1-203ENST00000460264 Q6ZS49 121 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 ZNF491Q8N8L2 437 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 OR5M8Q8NGP6 311 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 OR51E2Q9H255 320 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 GNB4Q9HAV0 340 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 METTL1Q9UBP6 276 aaKnown RBP14.73□□□□□ -0.05
COL5A1-203ENST00000460264 ELF5Q9UKW6 265 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-203ENST00000460264 VSIG4Q9Y279 399 aa14.73□□□□□ -0.05
COL5A1-203ENST00000460264 COL7A1Q02388 2944 aa14.72□□□□□ -0.05
COL5A1-203ENST00000460264 IGKV1D-8A0A087WSZ0 117 aa14.72□□□□□ -0.05
COL5A1-203ENST00000460264 SOX15O60248 233 aa14.72□□□□□ -0.05
COL5A1-203ENST00000460264 SPDEFO95238 335 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms