RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ADAM5Q6NVV9 412 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 RBMS3Q6XE24 437 aaKnown RBP10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 GCNT2Q8N0V5 402 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 PRR18Q8N4B5 295 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 FDCSPQ8NFU4 85 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 TCTEX1D2Q8WW35 142 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 NINJ1Q92982 152 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 ZNF251Q9BRH9 671 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 VSIRQ9H7M9 311 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 ZNF71Q9NQZ8 489 aaPredicted RBP10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 GNG13Q9P2W3 67 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 GAB2Q9UQC2 676 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 R4GN57 208 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 CTXND1A0A1B0GTU2 59 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 MAP1LC3B2A6NCE7 125 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 MBD3L4A6NDZ8 208 aaPredicted RBP10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 MBD3L3A6NE82 208 aaPredicted RBP10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 MBD3L5A6NJ08 208 aaPredicted RBP10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 TMEM250H0YL14 139 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 WNT9BO14905 357 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 RBFOX2O43251 390 aaKnown RBP eCLIP10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 ZNF737O75373 536 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 ZNF16P17020 682 aaPredicted RBP10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 HOXA5P20719 270 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 CEBPDP49716 269 aaPredicted RBP10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 VWA1Q6PCB0 445 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 SSX7Q7RTT5 188 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 VASH2Q86V25 355 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 OR52L2PQ8NGH6 319 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 MBD3L2Q8NHZ7 208 aaPredicted RBP10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 Q8WTZ3 238 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 DIRC2Q96SL1 478 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 MAP1LC3BQ9GZQ8 125 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 ZNF665Q9H7R5 613 aa10.46□□□□□ -0.74
ECHDC1-209ENST00000454591 IGHV1-18A0A0C4DH31 117 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 OR5H1A6NKK0 313 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 C17orf98A8MV24 154 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 SRRM5B3KS81 715 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 SPINT2O43291 252 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 TIMM8AO60220 97 aaPredicted RBP10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 RAMP3O60896 148 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 TNFSF13O75888 250 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 S1PR2O95136 353 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 CLDN1O95832 211 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 FBP1P09467 338 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 GZMHP20718 246 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 GCH1P30793 250 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 COL10A1Q03692 680 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 AESQ08117 197 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 WDR25Q64LD2 544 aaPredicted RBP10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 ZNF826PQ6ZT77 177 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 RPP25LQ8N5L8 163 aaKnown RBP10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 EDARADDQ8WWZ3 215 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 TMPRSS5Q9H3S3 457 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 JPT1Q9UK76 154 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 WASF3Q9UPY6 502 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 KNTC1P50748 2209 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 CFAP54Q96N23 3096 aa10.45□□□□□ -0.74
ECHDC1-209ENST00000454591 TRBV24-1A0A075B6N3 115 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 CLDN34H7C241 214 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 NKX2-8O15522 239 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 G6PCP35575 357 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 GABRA2P47869 451 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 ERVFRD-1P60508 538 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 CYP2G1PQ6ZSU1 146 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 OR10P1Q8NGE3 313 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 OR13A1Q8NGR1 328 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 OR52E5Q8NH55 327 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 UBALD1Q8TB05 177 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 DTD1Q8TEA8 209 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 SNX22Q96L94 193 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 MANBALQ9NQG1 85 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 SLC39A9Q9NUM3 307 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 DKK4Q9UBT3 224 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 SLC25A15Q9Y619 301 aa10.44□□□□□ -0.74
ECHDC1-209ENST00000454591 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 ZNF727A8MUV8 499 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 F2RL2O00254 374 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 YPEL1O60688 119 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 AGFG2O95081 481 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 IGKV1D-33P01593 117 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 IGKV1-33P01594 117 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 CXCL1P09341 107 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 CCL11P51671 97 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 RAB11AP62491 216 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 KIAA2026Q5HYC2 2103 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 PRAMEF6Q5VXH4 476 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 LCN15Q6UWW0 184 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 BEND4Q6ZU67 534 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 BHLHA15Q7RTS1 189 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 H2BFWTQ7Z2G1 175 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 CXorf67Q86X51 503 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 CD177Q8N6Q3 437 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 CNEP1R1Q8N9A8 125 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 PPP1R35Q8TAP8 253 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 MRGPRDQ8TDS7 321 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 STARD4Q96DR4 205 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 YPEL2Q96QA6 119 aa10.43□□□□□ -0.74
ECHDC1-209ENST00000454591 PYGO2Q9BRQ0 406 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms