RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SLC7A10Q9NS82 523 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 CENPMQ9NSP4 180 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SIGLEC8Q9NYZ4 499 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 PSENENQ9NZ42 101 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 NXT1Q9UKK6 140 aaKnown RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 PLAGL1Q9UM63 463 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 YTHDF2Q9Y5A9 579 aaKnown RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SOX21Q9Y651 276 aaPredicted RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 COL4A3Q01955 1670 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SCN3AQ9NY46 2000 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 IGKV1D-42A0A075B6H8 117 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A0A6YYD4 124 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A1W2PQD3 144 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A1W2PS18 150 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 hADV38S2A0JD32 116 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 MED19A0JLT2 244 aaPredicted RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR2T8A6NH00 312 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 KLRC4-KLRK1H3BQV0 150 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 H3BSH0 61 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 M0R296 226 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 EFEMP2O95967 443 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 GHRHP01286 108 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 APOA2P02652 100 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 SP9P0CG40 484 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 CD70P32970 193 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR3A4PP47883 348 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR1D4P47884 311 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 FABP6P51161 128 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 CRYBA4P53673 196 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 FUT7Q11130 342 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 SRSF6Q13247 344 aaKnown RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 SQSTM1Q13501 440 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 KLF5Q13887 457 aaPredicted RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 RTP5Q14D33 572 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 PDGFRLQ15198 375 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 SP6Q3SY56 376 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 TDRG1Q3Y452 100 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 TIGITQ495A1 244 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM52BQ4KMG9 183 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM97Q5BJF2 176 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 TIMM23BQ5SRD1 257 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 PRAMEF5Q5TYX0 476 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 PRAMEF6Q5VXH4 476 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 PARM1Q6UWI2 310 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 ASCL4Q6XD76 172 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 FOXI2Q6ZQN5 318 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 LHFPL2Q6ZUX7 228 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 CPEB2Q7Z5Q1 589 aaKnown RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 TBC1D26Q86UD7 250 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 MMD2Q8IY49 270 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR5AS1Q8N127 324 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 METTL27Q8N6F8 245 aaPredicted RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 Q8N976 141 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 LMX1AQ8TE12 382 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 SPSB4Q96A44 273 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 APOBEC3DQ96AK3 386 aaPredicted RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 ADAT3Q96EY9 351 aaPredicted RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 COX14Q96I36 57 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 C1orf147Q96MC9 270 aaPredicted RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 AMELYQ99218 206 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM110AQ9BQ89 295 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 MAP1LC3CQ9BXW4 147 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 GEMIN7Q9H840 131 aaKnown RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 GNB4Q9HAV0 340 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 OSTCQ9NRP0 149 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 PHPT1Q9NRX4 125 aaPredicted RBP4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 KCNS2Q9ULS6 477 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 MMP17Q9ULZ9 603 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 CYSLTR1Q9Y271 337 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF257Q9Y2Q1 563 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 RNF115Q9Y4L5 304 aa4.79□□□□□ -1.64
VTI1BP4-201ENST00000427516 DENND4CQ5VZ89 1909 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A0G2JLM5 398 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 TEX50A0A1B0GTY4 177 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 SCO2A0A1W2PP80 73 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A1W2PR80 420 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR4C46A6NHA9 309 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 LRRC30A6NM36 301 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 C22orf46C9J442 243 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 F5H5K5 113 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 ISLRO14498 428 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 PAGE4O60829 102 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 PDCD6O75340 191 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 DHRS3O75911 302 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 CGAP01215 116 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 SMIM10L1P0DMW3 83 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 CTLA4P16410 223 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 NTF3P20783 257 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 CBLN1P23435 193 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 CTSSP25774 331 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 FKBP2P26885 142 aaKnown RBP4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 CD52P31358 61 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 SSTR5P35346 364 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 DRD3P35462 400 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 CA7P43166 264 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 IER3P46695 156 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 GPR12P47775 334 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 METAP1P53582 386 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms