RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 ARSBP15848 533 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 ZBTB25P24278 435 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 CEACAM6P40199 344 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 TMEM267Q0VDI3 215 aaPredicted RBP14.3□□□□□ -0.12
SREBF1-206ENST00000423161 IRF3Q14653 427 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 DLX4Q92988 240 aaPredicted RBP14.3□□□□□ -0.12
SREBF1-206ENST00000423161 GFI1Q99684 422 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 TOLLIPQ9H0E2 274 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 C12orf4Q9NQ89 552 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 GAB2Q9UQC2 676 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 SMAD5-AS1Q9Y6J3 95 aa14.3□□□□□ -0.12
SREBF1-206ENST00000423161 IGHV4OR15-8A0A075B7B6 117 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 A0A087WW49 117 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 HSMCR30P0CW71 290 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 EGR2P11161 476 aaPredicted RBP14.29□□□□□ -0.12
SREBF1-206ENST00000423161 RPS25P62851 125 aaKnown RBP14.29□□□□□ -0.12
SREBF1-206ENST00000423161 PYHIN1Q6K0P9 492 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 CD200R1LQ6Q8B3 271 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 UNQ5815/PRO19632Q6UWF5 114 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 TMEM91Q6ZNR0 172 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 PPP1R27Q86WC6 154 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 FAM89BQ8N5H3 189 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 CLCC1Q96S66 551 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 RNF5Q99942 180 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 FAM103A1Q9BTL3 118 aaKnown RBP14.29□□□□□ -0.12
SREBF1-206ENST00000423161 Q9N2K0 584 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 METTL1Q9UBP6 276 aaKnown RBP14.29□□□□□ -0.12
SREBF1-206ENST00000423161 RNF150Q9ULK6 438 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 HSF4Q9ULV5 492 aa14.29□□□□□ -0.12
SREBF1-206ENST00000423161 AK6Q9Y3D8 172 aaKnown RBP14.29□□□□□ -0.12
SREBF1-206ENST00000423161 FOXI3A8MTJ6 420 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-206ENST00000423161 SCTP09683 121 aa14.28□□□□□ -0.12
SREBF1-206ENST00000423161 CPEP16870 476 aa14.28□□□□□ -0.12
SREBF1-206ENST00000423161 VEGFCP49767 419 aa14.28□□□□□ -0.12
SREBF1-206ENST00000423161 RAB11BQ15907 218 aa14.28□□□□□ -0.12
SREBF1-206ENST00000423161 ACTBL2Q562R1 376 aa14.28□□□□□ -0.12
SREBF1-206ENST00000423161 DRAXINQ8NBI3 349 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-206ENST00000423161 CMSS1Q9BQ75 279 aaKnown RBP14.28□□□□□ -0.12
SREBF1-206ENST00000423161 PECRQ9BY49 303 aa14.28□□□□□ -0.12
SREBF1-206ENST00000423161 ZNF221Q9UK13 617 aa14.28□□□□□ -0.12
SREBF1-206ENST00000423161 PROP1O75360 226 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 ARL6IP5O75915 188 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 CA2P00918 260 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 IGHV3-11P01762 117 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 TMEM50BP56557 158 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 TPBGQ13641 420 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 PSG5Q15238 335 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 TRAM1Q15629 374 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 LFNGQ8NES3 379 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 PTX4Q96A99 478 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 ARHGAP5-AS1Q96IT6 56 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 MS4A10Q96PG2 267 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 TSNAXQ99598 290 aaKnown RBP14.27□□□□□ -0.13
SREBF1-206ENST00000423161 TPSG1Q9NRR2 321 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 TPRKBQ9Y3C4 175 aa14.27□□□□□ -0.13
SREBF1-206ENST00000423161 SPDEFO95238 335 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 IGKV1-16P04430 117 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 SNRPBP14678 240 aaKnown RBP14.26□□□□□ -0.13
SREBF1-206ENST00000423161 SPNP16150 400 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 AQP4P55087 323 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 CLDN12P56749 244 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 TPPP2P59282 170 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 RPS16P62249 146 aaKnown RBP14.26□□□□□ -0.13
SREBF1-206ENST00000423161 AKIRIN2Q53H80 203 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 ACSM6Q6P461 480 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 ZNF562Q6V9R5 426 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 ZNF383Q8NA42 475 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 ARPC1AQ92747 370 aa14.26□□□□□ -0.13
SREBF1-206ENST00000423161 NKX1-2Q9UD57 310 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-206ENST00000423161 IGKV1-6A0A0C4DH72 117 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 ANKRD65E5RJM6 399 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 RGS10O43665 173 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 APOA2P02652 100 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 TFAP2AP05549 437 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 PSMA1P25786 263 aaKnown RBP14.25□□□□□ -0.13
SREBF1-206ENST00000423161 CALRP27797 417 aaKnown RBP14.25□□□□□ -0.13
SREBF1-206ENST00000423161 CD40LGP29965 261 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 LINC00205P59089 165 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 PITPNAQ00169 270 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 PDPNQ86YL7 162 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 OR56B1Q8NGI3 324 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 OR6Q1Q8NGQ2 317 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 FAM3DQ96BQ1 224 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 FLYWCH2Q96CP2 140 aaKnown RBP14.25□□□□□ -0.13
SREBF1-206ENST00000423161 DUSP21Q9H596 190 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 SLA2Q9H6Q3 261 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 RDH8Q9NYR8 311 aa14.25□□□□□ -0.13
SREBF1-206ENST00000423161 TRDCB7Z8K6 153 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 M0R1X1 148 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 SLC25A17O43808 307 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 TRGV3P03979 118 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 HSPB1P04792 205 aaKnown RBP14.24□□□□□ -0.13
SREBF1-206ENST00000423161 OR8U9P0C7N5 309 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 GP9P14770 177 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 MLLT11Q13015 90 aaPredicted RBP14.24□□□□□ -0.13
SREBF1-206ENST00000423161 PLAC9Q5JTB6 97 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 GRPEL2Q8TAA5 225 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 CCDC90BQ9GZT6 254 aa14.24□□□□□ -0.13
SREBF1-206ENST00000423161 DENRO43583 198 aaKnown RBP14.23□□□□□ -0.13
SREBF1-206ENST00000423161 MRPS15P82914 257 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms