RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 CENPVL3A0A0U1RRI6 287 aa16.42■□□□□ 0.22
PTPA-208ENST00000411917 LEUTXA8MZ59 168 aa16.42■□□□□ 0.22
PTPA-208ENST00000411917 INMT-MINDY4F8WBC2 141 aa16.42■□□□□ 0.22
PTPA-208ENST00000411917 ARPC1BO15143 372 aaKnown RBP16.42■□□□□ 0.22
PTPA-208ENST00000411917 IGHV1-69P01742 117 aa16.42■□□□□ 0.22
PTPA-208ENST00000411917 PIGPP57054 158 aa16.42■□□□□ 0.22
PTPA-208ENST00000411917 LYG1Q8N1E2 194 aa16.42■□□□□ 0.22
PTPA-208ENST00000411917 TMUB1Q9BVT8 246 aa16.42■□□□□ 0.22
PTPA-208ENST00000411917 ARHGAP32A7KAX9 2087 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 CRYM-AS1A6NIL9 109 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 PROP1O75360 226 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 PGLYRP1O75594 196 aaPredicted RBP16.41■□□□□ 0.22
PTPA-208ENST00000411917 DHFRP00374 187 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 ARG1P05089 322 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 COX7A1P24310 79 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 BAMBIQ13145 260 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 CATR1Q13166 79 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 GPR157Q5UAW9 335 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 CCDC144NLQ6NUI1 221 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 C9orf139Q6ZV77 190 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 OR8H3Q8N146 312 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 RTN4IP1Q8WWV3 396 aaPredicted RBP16.41■□□□□ 0.22
PTPA-208ENST00000411917 LHX4Q969G2 390 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 TMEM230Q96A57 120 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 MALSU1Q96EH3 234 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 ABHD14BQ96IU4 210 aa16.41■□□□□ 0.22
PTPA-208ENST00000411917 MPPED1O15442 326 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 RBFOX2O43251 390 aaKnown RBP eCLIP16.4■□□□□ 0.221e-5■■■■□ 19.7
PTPA-208ENST00000411917 RLN1P04808 185 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 SPNP16150 400 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 EPHA1P21709 976 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 F2RP25116 425 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 DUTP33316 252 aaKnown RBP16.4■□□□□ 0.22
PTPA-208ENST00000411917 THBS3P49746 956 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 CD300LFQ8TDQ1 290 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 C5orf30Q96GV9 206 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 NAA60Q9H7X0 242 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 LIN7CQ9NUP9 197 aaKnown RBP16.4■□□□□ 0.22
PTPA-208ENST00000411917 FLVCR2Q9UPI3 526 aa16.4■□□□□ 0.22
PTPA-208ENST00000411917 ZANQ9Y493 2812 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 A0A1W2PPE3 182 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 SNRPGP15A8MWD9 76 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 H0Y980 276 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 HSD17B6O14756 317 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 NPFFO15130 113 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 IGHV3-7P01780 117 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 GAPDHP04406 335 aaKnown RBP16.39■□□□□ 0.21
PTPA-208ENST00000411917 OR4E1P0C645 316 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 KIR2DS2P43631 304 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 LGALS4P56470 323 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 KLRD1Q13241 179 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 HABP2Q14520 560 aaPredicted RBP16.39■□□□□ 0.21
PTPA-208ENST00000411917 TPTE2P1Q5T6R2 138 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 GLDNQ6ZMI3 551 aaPredicted RBP16.39■□□□□ 0.21
PTPA-208ENST00000411917 C1orf229Q6ZS94 237 aaPredicted RBP16.39■□□□□ 0.21
PTPA-208ENST00000411917 SGPP2Q8IWX5 399 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 NANPQ8TBE9 248 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 DDB2Q92466 427 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 RNF150Q9ULK6 438 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 KCNIP3Q9Y2W7 256 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 WNK2Q9Y3S1 2297 aa16.39■□□□□ 0.21
PTPA-208ENST00000411917 TRAV6A0A075B6T7 132 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 C7orf66A4D0T2 115 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 SMAD7O15105 426 aaKnown RBP16.38■□□□□ 0.21
PTPA-208ENST00000411917 AVPP01185 164 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 RRASP10301 218 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 ANXA3P12429 323 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 KLF17Q5JT82 389 aaPredicted RBP16.38■□□□□ 0.21
PTPA-208ENST00000411917 Q6ZNX1 250 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 TMED4Q7Z7H5 227 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 TGIF2LXQ8IUE1 241 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 OR5AN1Q8NGI8 311 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 RPEQ96AT9 228 aa16.38■□□□□ 0.21
PTPA-208ENST00000411917 ABCA1O95477 2261 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 TRAV40A0A0B4J280 105 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 A0A0B4J2A0 478 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 RPA2P15927 270 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 DLX1P56177 255 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 SUPT4H1P63272 117 aaKnown RBP16.37■□□□□ 0.21
PTPA-208ENST00000411917 SRPXP78539 464 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 AANATQ16613 207 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 PHLDA2Q53GA4 152 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 RPL39P5Q59GN2 51 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 TBC1D26Q86UD7 250 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 ADAD2Q8NCV1 583 aaKnown RBP16.37■□□□□ 0.21
PTPA-208ENST00000411917 AJUBAQ96IF1 538 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 GPN1Q9HCN4 374 aaPredicted RBP16.37■□□□□ 0.21
PTPA-208ENST00000411917 SHPKQ9UHJ6 478 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 PRELID3BQ9Y3B1 194 aa16.37■□□□□ 0.21
PTPA-208ENST00000411917 SETXQ7Z333 2677 aaKnown RBP16.36■□□□□ 0.21
PTPA-208ENST00000411917 C3orf85A0A1B0GTC6 90 aa16.36■□□□□ 0.21
PTPA-208ENST00000411917 M0R1X1 148 aa16.36■□□□□ 0.21
PTPA-208ENST00000411917 SFT2D2O95562 160 aa16.36■□□□□ 0.21
PTPA-208ENST00000411917 DUS4LO95620 317 aaKnown RBP16.36■□□□□ 0.21
PTPA-208ENST00000411917 CT45A6P0DMU7 189 aa16.36■□□□□ 0.21
PTPA-208ENST00000411917 CT45A5P0DMU8 189 aa16.36■□□□□ 0.21
PTPA-208ENST00000411917 CT45A7P0DMV0 189 aa16.36■□□□□ 0.21
PTPA-208ENST00000411917 PI3P19957 117 aa16.36■□□□□ 0.21
PTPA-208ENST00000411917 ANXA7P20073 488 aaKnown RBP16.36■□□□□ 0.21
PTPA-208ENST00000411917 UCP1P25874 307 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms