RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 GSTT2P0CG29 244 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 GSTT2BP0CG30 244 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 VDAC1P21796 283 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 GADD45AP24522 165 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 MYCNOSP40205 109 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 IGSF11Q5DX21 431 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 CXorf66Q5JRM2 361 aaPredicted RBP13.85□□□□□ -0.19
LSM5-204ENST00000409909 LIN54Q6MZP7 749 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 TOLLIPQ9H0E2 274 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 OR51E2Q9H255 320 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 OR51J1Q9H342 316 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 WSB1Q9Y6I7 421 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 METTL21EPA6NDL7 271 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 NOTOA8MTQ0 251 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 ATP6V0E1O15342 81 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 SNRPBP14678 240 aaKnown RBP13.84□□□□□ -0.19
LSM5-204ENST00000409909 PSMB8P28062 276 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 PPIFP30405 207 aaKnown RBP13.84□□□□□ -0.19
LSM5-204ENST00000409909 MC5RP33032 325 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 CDX1P47902 265 aaPredicted RBP13.84□□□□□ -0.19
LSM5-204ENST00000409909 KRTAP10-11P60412 298 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 MRPS15P82914 257 aaKnown RBP13.84□□□□□ -0.19
LSM5-204ENST00000409909 TPRA1Q86W33 373 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 ATG5Q9H1Y0 275 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 FBXL15Q9H469 300 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 SSR3Q9UNL2 185 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 WASHC3Q9Y3C0 194 aa13.84□□□□□ -0.19
LSM5-204ENST00000409909 TRBV6-7A0A0A0MS04 114 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 H7C2Y5 167 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 FCN1O00602 326 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 RRHO14718 337 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 BET1O15155 118 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 SERPINB10P48595 397 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 NDPQ00604 133 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 DEFB136Q30KP8 78 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 ZNF383Q8NA42 475 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 MYOZ3Q8TDC0 251 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 CHCHD6Q9BRQ6 235 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 CABLES2Q9BTV7 478 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 KLK15Q9H2R5 256 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 RNF167Q9H6Y7 350 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 PARP11Q9NR21 331 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 KIAA1456Q9P272 454 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 ZNF221Q9UK13 617 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 FBXO7Q9Y3I1 522 aa13.83□□□□□ -0.2
LSM5-204ENST00000409909 IGKV1D-8A0A087WSZ0 117 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 CCL24O00175 119 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 DUS4LO95620 317 aaKnown RBP13.82□□□□□ -0.2
LSM5-204ENST00000409909 IGLV1-40P01703 118 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 IGKV1-16P04430 117 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 GSTP1P09211 210 aaKnown RBP13.82□□□□□ -0.2
LSM5-204ENST00000409909 OR5H8P0DN80 308 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 SDC2P34741 201 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 KIAA0141Q14154 515 aaPredicted RBP13.82□□□□□ -0.2
LSM5-204ENST00000409909 KIR2DS1Q14954 304 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 CDNFQ49AH0 187 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 DAPK2Q9UIK4 370 aa13.82□□□□□ -0.2
LSM5-204ENST00000409909 RRP15Q9Y3B9 282 aaKnown RBP13.82□□□□□ -0.2
LSM5-204ENST00000409909 TRAV41A0A0B4J266 112 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 RBBP9O75884 186 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 CLEC2LP0C7M8 214 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 OR8U9P0C7N5 309 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 EGR2P11161 476 aaPredicted RBP13.81□□□□□ -0.2
LSM5-204ENST00000409909 HOXD3P31249 432 aaPredicted RBP13.81□□□□□ -0.2
LSM5-204ENST00000409909 CX3CL1P78423 397 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 ARFRP1Q13795 201 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 PSG5Q15238 335 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 NEDD8Q15843 81 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 KCTD21Q4G0X4 260 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 C19orf54Q5BKX5 351 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 SFXN4Q6P4A7 337 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 Q6ZS49 121 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 MINDY2Q8NBR6 621 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 OR8U1Q8NH10 309 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 OR10J5Q8NHC4 309 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 MRAPQ8TCY5 172 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 C5orf30Q96GV9 206 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 RNF5Q99942 180 aa13.81□□□□□ -0.2
LSM5-204ENST00000409909 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.81□□□□□ -0.2
LSM5-204ENST00000409909 COL7A1Q02388 2944 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 M0R1X1 148 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 DIRAS3O95661 229 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 TFAP2AP05549 437 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 TALDO1P37837 337 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 MXD1Q05195 221 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 EGFEM1PQ0D2K5 195 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 SRSF7Q16629 238 aaKnown RBP eCLIP13.8□□□□□ -0.2
LSM5-204ENST00000409909 ZNF660Q6AZW8 331 aaPredicted RBP13.8□□□□□ -0.2
LSM5-204ENST00000409909 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.8□□□□□ -0.2
LSM5-204ENST00000409909 OR2D2Q9H210 308 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 SDHAF2Q9NX18 166 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 GAB2Q9UQC2 676 aa13.8□□□□□ -0.2
LSM5-204ENST00000409909 LOC100506127A0A0U1RQW1 187 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 CD36P16671 472 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 CRIP2P52943 208 aaPredicted RBP13.79□□□□□ -0.2
LSM5-204ENST00000409909 PLGLAQ15195 96 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 HACD4Q5VWC8 232 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 ZNF491Q8N8L2 437 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 LGALS14Q8TCE9 139 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 C4orf3Q8WVX3 66 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms