RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ZNF273Q14593 569 aa14.36□□□□□ -0.11
PCDHA13-202ENST00000409494 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.36□□□□□ -0.11
PCDHA13-202ENST00000409494 TM2D1Q9BX74 207 aa14.36□□□□□ -0.11
PCDHA13-202ENST00000409494 DNAJC13O75165 2243 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 WDR81Q562E7 1941 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 SEC11BP0C7V7 166 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 ZNF788Q6ZQV5 615 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 LYZL2Q7Z4W2 148 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 TUBD1Q9UJT1 453 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 PNRC1Q12796 327 aaPredicted RBP14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 RTN4RL2Q86UN3 420 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 NPVFQ9HCQ7 196 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 LINC01560Q8TB33 94 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 FAM222BQ8WU58 562 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 ZNF716A6NP11 495 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 G6PCP35575 357 aa14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 RPL8P62917 257 aaKnown RBP14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 UBE2L3P68036 154 aaKnown RBP14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 HDHD3Q9BSH5 251 aaPredicted RBP14.35□□□□□ -0.11
PCDHA13-202ENST00000409494 TMEM241Q24JQ0 296 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 SLC24A4Q8NFF2 622 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 OR10D4PQ8NGN7 298 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 ISOC2Q96AB3 205 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 DEPPQ9NTK1 212 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 SLC2A8Q9NY64 477 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 PHOX2AO14813 284 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 FAM210BQ96KR6 192 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 TXNDC17Q9BRA2 123 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 TRAV30A0A087WSZ9 112 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 TRAV39A0A0B4J263 110 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 AP4M1O00189 453 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 ZNF737O75373 536 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 OR4C13Q8NGP0 309 aa14.34□□□□□ -0.11
PCDHA13-202ENST00000409494 ORM2P19652 201 aa14.33□□□□□ -0.11
PCDHA13-202ENST00000409494 ERVFC1-1P60608 527 aa14.33□□□□□ -0.11
PCDHA13-202ENST00000409494 EWSR1Q01844 656 aaKnown RBP eCLIP14.33□□□□□ -0.11
PCDHA13-202ENST00000409494 ASCL3Q9NQ33 180 aa14.33□□□□□ -0.11
PCDHA13-202ENST00000409494 LAMTOR1Q6IAA8 161 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 OR8I2Q8N0Y5 310 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 FBLN5Q9UBX5 448 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 A0A1W2PS18 150 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 OPN1MWP04001 364 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 OPN1MW2P0DN77 364 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 OPN1MW3P0DN78 364 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 ID1P41134 155 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 ACP7Q6ZNF0 438 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 ABHD12Q8N2K0 398 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 FAM216AQ8WUB2 273 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 LSM10Q969L4 123 aaKnown RBP14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 SMDT1Q9H4I9 107 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 C17orf100A8MU93 164 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 LYPD3O95274 346 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 CYB5R3P00387 301 aaPredicted RBP14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 FABP4P15090 132 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 TMEM204Q9BSN7 226 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 ZDHHC11Q9H8X9 412 aa14.33□□□□□ -0.12
PCDHA13-202ENST00000409494 A0A1W2PP11 408 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 CDRT15L2A8MXV6 281 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 KCNAB3O43448 404 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 SCTP09683 121 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 GNG4P50150 75 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 FAM74A3Q4VXF1 159 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 PLSCR4Q9NRQ2 329 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 CEP250Q9BV73 2442 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 TRAV20A0A0B4J274 112 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 CD74P04233 296 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 ZNF385CQ66K41 422 aaPredicted RBP14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 STPG3Q8N7X2 389 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 LMX1BO60663 402 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 BSPH1Q075Z2 132 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 GTF3AQ92664 365 aaKnown RBP14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 OR5AC2Q9NZP5 309 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 SCN2AQ99250 2005 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 HIST1H1EP10412 219 aaKnown RBP14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 GALR1P47211 349 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 IGSF11Q5DX21 431 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 RALGAPA1Q6GYQ0 2036 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 MDS2Q8NDY4 140 aa14.32□□□□□ -0.12
PCDHA13-202ENST00000409494 CTXND1A0A1B0GTU2 59 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 HSPE1P61604 102 aaKnown RBP14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 B2MP61769 119 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 C10orf113Q5VZT2 155 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 UNQ6494/PRO21346Q6UXR6 183 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 Q6ZS92 163 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 OR1B1Q8NGR6 318 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 DYRK2Q92630 601 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 SOSTQ9BQB4 213 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 C17orf51A8MQB3 221 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 PITX3O75364 302 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 MELTFP08582 738 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 RAB9AP51151 201 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 ZP1P60852 638 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 ZNF154Q13106 437 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 KHDC3LQ587J8 217 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 SLC16A13Q7RTY0 426 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 RCC1P18754 421 aaPredicted RBP14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 RAB5AP20339 215 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 GUCA2BQ16661 112 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 PLA2G2CQ5R387 149 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 CBLN4Q9NTU7 201 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms