RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PLA2G2EQ9NZK7 142 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.16■□□□□ 0.34
USP39-203ENST00000409470 LINC00473A8K010 186 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 H3BP45 60 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 CLDN14O95500 239 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 DYNLT3P51808 116 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 BLOC1S1P78537 153 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 C17orf58Q2M2W7 97 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 MST1LQ2TV78 715 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 C1orf87Q8N0U7 546 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 FAM216AQ8WUB2 273 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 NARS2Q96I59 477 aaKnown RBP17.16■□□□□ 0.34
USP39-203ENST00000409470 MMP26Q9NRE1 261 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 TRAV38-1A0A0B4J264 116 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 KBTBD11-OT1A0A1B0GTJ5 212 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 NUDT19A8MXV4 375 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 SIGLEC5O15389 551 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 TMPRSS2O15393 492 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 SCO1O75880 301 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 CGB3P0DN86 165 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 CGB7P0DN87 165 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 SPP1P10451 314 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 IAPPP10997 89 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 UQCC3Q6UW78 93 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 STX12Q86Y82 276 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 BPIFCQ8NFQ6 507 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 NARFLQ9H6Q4 476 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 CLN8Q9UBY8 286 aa17.16■□□□□ 0.34
USP39-203ENST00000409470 DLL1O00548 723 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 TOR1AO14656 332 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 BRWD1-AS2P59051 145 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 LINC00205P59089 165 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 FBXL19-AS1Q494R0 122 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 ODF3L1Q8IXM7 274 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 STPG2Q8N412 459 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 KDF1Q8NAX2 398 aaPredicted RBP17.15■□□□□ 0.34
USP39-203ENST00000409470 CCL17Q92583 94 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 SH3BGRL3Q9H299 93 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 WSB1Q9Y6I7 421 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 USF3Q68DE3 2245 aa17.15■□□□□ 0.34
USP39-203ENST00000409470 Q6ZRG5 221 aa17.14■□□□□ 0.34
USP39-203ENST00000409470 COA4Q9NYJ1 87 aa17.14■□□□□ 0.34
USP39-203ENST00000409470 NUP50Q9UKX7 468 aa17.14■□□□□ 0.34
USP39-203ENST00000409470 CRYZL1O95825 349 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 NDUFB7P17568 137 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 APOBEC3AP31941 199 aaPredicted RBP17.14■□□□□ 0.33
USP39-203ENST00000409470 ZNF134P52741 427 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 IL34Q6ZMJ4 242 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 ZNF295-AS1Q8N0V1 137 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 ZCCHC14Q8WYQ9 949 aaKnown RBP17.14■□□□□ 0.33
USP39-203ENST00000409470 LEAP2Q969E1 77 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 MS4A5Q9H3V2 200 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 KCNJ16Q9NPI9 418 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 PARP11Q9NR21 331 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 GFOD1Q9NXC2 390 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 PSENENQ9NZ42 101 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 LAMP3Q9UQV4 416 aa17.14■□□□□ 0.33
USP39-203ENST00000409470 DIDO1Q9BTC0 2240 aaKnown RBP17.14■□□□□ 0.33
USP39-203ENST00000409470 PPIAL4EA0A075B759 164 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 PPIAL4DF5H284 164 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 TMEM178BH3BS89 294 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 M0R1X1 148 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 TXNL1O43396 289 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 PPIAL4FP0DN26 164 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 GRNP28799 593 aaKnown RBP17.13■□□□□ 0.33
USP39-203ENST00000409470 DUTP33316 252 aaKnown RBP17.13■□□□□ 0.33
USP39-203ENST00000409470 TMEM267Q0VDI3 215 aaPredicted RBP17.13■□□□□ 0.33
USP39-203ENST00000409470 CD300LFQ8TDQ1 290 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 PPIAL4AQ9Y536 164 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 NBEAQ8NFP9 2946 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 FAM90A26D6RGX4 464 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 NFYBP25208 207 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 SULT1A1P50225 295 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 RAB7AP51149 207 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 PJVKQ0ZLH3 352 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 NCR3LG1Q68D85 454 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 H2BFWTQ7Z2G1 175 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 ADGRG4Q8IZF6 3080 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 LRRC46Q96FV0 321 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 ABHD14AQ9BUJ0 271 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 IFI27L2Q9H2X8 130 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 TMEM106BQ9NUM4 274 aa17.13■□□□□ 0.33
USP39-203ENST00000409470 ZNF729A6NN14 1252 aaPredicted RBP17.12■□□□□ 0.33
USP39-203ENST00000409470 DANCRP0C864 163 aa17.12■□□□□ 0.33
USP39-203ENST00000409470 P0C879 139 aa17.12■□□□□ 0.33
USP39-203ENST00000409470 ADORA2A-AS1P86434 159 aa17.12■□□□□ 0.33
USP39-203ENST00000409470 AKR1C1Q04828 323 aa17.12■□□□□ 0.33
USP39-203ENST00000409470 RPL39P5Q59GN2 51 aa17.12■□□□□ 0.33
USP39-203ENST00000409470 TCF23Q7RTU1 214 aa17.12■□□□□ 0.33
USP39-203ENST00000409470 SLC25A10Q9UBX3 287 aaPredicted RBP17.12■□□□□ 0.33
USP39-203ENST00000409470 SLC31A2O15432 143 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 FCGR3BO75015 233 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 PROP1O75360 226 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 PLAUP00749 431 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 PRH1P02810 166 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 F2RL1P55085 397 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 UBE2KP61086 200 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 UNQ6494/PRO21346Q6UXR6 183 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.11■□□□□ 0.33
USP39-203ENST00000409470 IDI2-AS1Q9NZ38 188 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms