RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 RNFT1Q5M7Z0 435 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 LURAP1LQ8IV03 231 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 HIST3H2BBQ8N257 126 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 TRBV23-1A0A0A0MS06 115 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 TRGV5A0A0B4J1U4 118 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 IQCF6A8MYZ5 107 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 C12orf77C9JDV5 145 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 KRASP01116 189 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 CD46P15529 392 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 CD81P60033 236 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 EIF4EBP1Q13541 118 aaPredicted RBP21.47■■□□□ 1.03
COL13A1-203ENST00000398969 GALMQ96C23 342 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 HES4Q9HCC6 221 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 TINAGQ9UJW2 476 aa21.47■■□□□ 1.03
COL13A1-203ENST00000398969 TRBV24-1A0A075B6N3 115 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 ELOA3CA0A087WX78 387 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-203ENST00000398969 TGOLN2O43493 480 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 PSG7Q13046 419 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 MSMO1Q15800 293 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 FAM53AQ6NSI3 398 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-203ENST00000398969 ACSM6Q6P461 480 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 GPR61Q9BZJ8 451 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 CTDSP1Q9GZU7 261 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 ASCL3Q9NQ33 180 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 OPN1MWP04001 364 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 OPN1MW2P0DN77 364 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 OPN1MW3P0DN78 364 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 PLA2G5P39877 138 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 UBE2NP61088 152 aaKnown RBP21.46■■□□□ 1.03
COL13A1-203ENST00000398969 ZNF816Q0VGE8 651 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-203ENST00000398969 HNF4GQ14541 408 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 OR52L2PQ8NGH6 319 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 OR10D4PQ8NGN7 298 aa21.46■■□□□ 1.03
COL13A1-203ENST00000398969 TMEM210A6NLX4 147 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 LRRC30A6NM36 301 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 CD55P08174 381 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 MEF2BQ02080 365 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-203ENST00000398969 FIP1L1Q6UN15 594 aaKnown RBP21.45■■□□□ 1.02
COL13A1-203ENST00000398969 ZNF808Q8N4W9 903 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-203ENST00000398969 AGMATQ9BSE5 352 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 CLN8Q9UBY8 286 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 ODAMA1E959 279 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 PHOX2AO14813 284 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 IGHV1-2P23083 117 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 CDPF1Q6NVV7 123 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 SMIM7Q9BQ49 75 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 NAT8Q9UHE5 227 aa21.45■■□□□ 1.02
COL13A1-203ENST00000398969 S1PR2O95136 353 aa21.44■■□□□ 1.02
COL13A1-203ENST00000398969 IL2RGP31785 369 aa21.44■■□□□ 1.02
COL13A1-203ENST00000398969 GMPPAQ96IJ6 420 aaPredicted RBP21.44■■□□□ 1.02
COL13A1-203ENST00000398969 FAM186AA6NE01 2351 aa21.44■■□□□ 1.02
COL13A1-203ENST00000398969 ATP6V1FQ16864 119 aa21.44■■□□□ 1.02
COL13A1-203ENST00000398969 PDZD11Q5EBL8 140 aa21.44■■□□□ 1.02
COL13A1-203ENST00000398969 KIAA2026Q5HYC2 2103 aa21.44■■□□□ 1.02
COL13A1-203ENST00000398969 CYP2G1PQ6ZSU1 146 aa21.44■■□□□ 1.02
COL13A1-203ENST00000398969 TMEM147Q9BVK8 224 aa21.44■■□□□ 1.02
COL13A1-203ENST00000398969 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.44■■□□□ 1.02
COL13A1-203ENST00000398969 CNOT1A5YKK6 2376 aaKnown RBP21.43■■□□□ 1.02
COL13A1-203ENST00000398969 C1QTNF9BB2RNN3 333 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 WNT9BO14905 357 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 HBZP02008 142 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 MPV17P39210 176 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 BRWD1-AS2P59051 145 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 SLC35E4Q6ICL7 350 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 SLC25A22Q9H936 323 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 OOEPA6NGQ2 149 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 PMS2P5A8MQ11 134 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 HMGB3O15347 200 aaKnown RBP21.43■■□□□ 1.02
COL13A1-203ENST00000398969 LYZL6O75951 148 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 PTBP3O95758 552 aaKnown RBP21.43■■□□□ 1.02
COL13A1-203ENST00000398969 RD3LP0DJH9 198 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 TGFBR3Q03167 851 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 AESQ08117 197 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 CATR1Q13166 79 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 C4orf17Q53FE4 359 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 ZNF826PQ6ZT77 177 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 OBP2BQ9NPH6 170 aa21.43■■□□□ 1.02
COL13A1-203ENST00000398969 C17orf98A8MV24 154 aa21.42■■□□□ 1.02
COL13A1-203ENST00000398969 HOXA4Q00056 320 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-203ENST00000398969 ADIRFQ15847 76 aa21.42■■□□□ 1.02
COL13A1-203ENST00000398969 NCR3LG1Q68D85 454 aa21.42■■□□□ 1.02
COL13A1-203ENST00000398969 CXorf67Q86X51 503 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-203ENST00000398969 ZNF383Q8NA42 475 aa21.42■■□□□ 1.02
COL13A1-203ENST00000398969 ZMAT5Q9UDW3 170 aaKnown RBP21.42■■□□□ 1.02
COL13A1-203ENST00000398969 DMXL1Q9Y485 3027 aa21.42■■□□□ 1.02
COL13A1-203ENST00000398969 CTXND1A0A1B0GTU2 59 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 MLNRO43193 412 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 KBTBD11O94819 623 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 SOX8P57073 446 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 TMEM241Q24JQ0 296 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 C11orf53Q8IXP5 236 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 KLF14Q8TD94 323 aaPredicted RBP21.41■■□□□ 1.02
COL13A1-203ENST00000398969 ZG16O60844 167 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 FGF7P21781 194 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 SRSF6Q13247 344 aaKnown RBP21.41■■□□□ 1.02
COL13A1-203ENST00000398969 COQ2Q96H96 371 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 ZDHHC11Q9H8X9 412 aa21.41■■□□□ 1.02
COL13A1-203ENST00000398969 NKX2-8O15522 239 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 PSMB3P49720 205 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 BTNL3Q6UXE8 466 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms