RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 FAM157AC9JC47 383 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 G3V3Q6 166 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 GOSR2O14653 212 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 MSMBP08118 114 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 GIPP09681 153 aaPredicted RBP11.2□□□□□ -0.62
VAPB-202ENST00000395802 F2RP25116 425 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 GNG10P50151 68 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 PAX2Q02962 417 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 LIN54Q6MZP7 749 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 UXS1Q8NBZ7 420 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 CD300LFQ8TDQ1 290 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 C1orf159Q96HA4 380 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 ADTRPQ96IZ2 230 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 REG4Q9BYZ8 158 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 PARP12Q9H0J9 701 aaKnown RBP11.2□□□□□ -0.62
VAPB-202ENST00000395802 SDHAF2Q9NX18 166 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 SHPKQ9UHJ6 478 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 VPS13CQ709C8 3753 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 IGHV2-26A0A0B4J1V2 119 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 TRAV20A0A0B4J274 112 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 DBX1A6NMT0 343 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 H0Y980 276 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 TOX4O94842 621 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 IGLV2-14P01704 120 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 DCAF12L2Q5VW00 463 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 LINC01356Q8N9X3 169 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 CASTOR1Q8WTX7 329 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 ABHD14BQ96IU4 210 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 FAM212BQ9NTI7 297 aaPredicted RBP11.19□□□□□ -0.62
VAPB-202ENST00000395802 INSIG2Q9Y5U4 225 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 SIX6O95475 246 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 IGHV3-7P01780 117 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 SERPINE2P07093 398 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 RPA2P15927 270 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 HLA-GP17693 338 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 TAGLNQ01995 201 aaKnown RBP11.19□□□□□ -0.62
VAPB-202ENST00000395802 OR11H6Q8NGC7 330 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 OR2T35Q8NGX2 323 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 Q96MF0 132 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 PRELID3BQ9Y3B1 194 aa11.19□□□□□ -0.62
VAPB-202ENST00000395802 SAA2-SAA4A0A096LPE2 208 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 TXNL1O43396 289 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 TNFSF12O43508 249 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 ATG12O94817 140 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 OR5AC1P0C628 307 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 SAA2P0DJI9 122 aaPredicted RBP11.18□□□□□ -0.62
VAPB-202ENST00000395802 CEACAM3P40198 252 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 KIR2DS2P43631 304 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 RAP2BP61225 183 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 SLC9A3R2Q15599 337 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 FAM53AQ6NSI3 398 aaPredicted RBP11.18□□□□□ -0.62
VAPB-202ENST00000395802 VMO1Q7Z5L0 202 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 LGI3Q8N145 548 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 Q8N7P7 452 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 OR5M8Q8NGP6 311 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 ASB13Q8WXK3 278 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 WDR89Q96FK6 387 aaPredicted RBP11.18□□□□□ -0.62
VAPB-202ENST00000395802 HYLS1Q96M11 299 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 CHIAQ9BZP6 476 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 TMEM222Q9H0R3 208 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 RANBP3Q9H6Z4 567 aaPredicted RBP11.18□□□□□ -0.62
VAPB-202ENST00000395802 MMP26Q9NRE1 261 aa11.18□□□□□ -0.62
VAPB-202ENST00000395802 RNF223E7ERA6 249 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 SLC31A2O15432 143 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 THBS3P49746 956 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 ZNF137PP52743 207 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 HLA-DRB5Q30154 266 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 LRTM2Q8N967 370 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 OR11H4Q8NGC9 324 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 OR51H1Q8NH63 302 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 IL22RA2Q969J5 263 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 SIRPDQ9H106 197 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 LPAR2Q9HBW0 351 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 SIRT7Q9NRC8 400 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 HECTD1Q9ULT8 2610 aa11.17□□□□□ -0.62
VAPB-202ENST00000395802 A0A1W2PPE3 182 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 DUXBA0A1W2PPF3 345 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 M0R1X1 148 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 IFNA21P01568 189 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 IGLV1-47P01700 117 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
VAPB-202ENST00000395802 DUTP33316 252 aaKnown RBP11.16□□□□□ -0.62
VAPB-202ENST00000395802 PAX8Q06710 450 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 SRSF4Q08170 494 aaKnown RBP11.16□□□□□ -0.62
VAPB-202ENST00000395802 Q5BKY6 102 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 ZNF833PQ6ZTB9 187 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 ZNF695Q8IW36 515 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 PNKDQ8N490 385 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 PCGF1Q9BSM1 259 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 RAB18Q9NP72 206 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
VAPB-202ENST00000395802 A0A096LNT2 108 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 LEUTXA8MZ59 168 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 BUB1B-PAK6H3BSN5 160 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 ARG1P05089 322 aa11.16□□□□□ -0.62
VAPB-202ENST00000395802 EPHA1P21709 976 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms