RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 TRAT1Q6PIZ9 186 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 LHFPL4Q7Z7J7 247 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 OR1L6Q8NGR2 347 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 FAM173AQ9BQD7 235 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 PCED1AQ9H1Q7 454 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 LYRM2Q9NU23 88 aaPredicted RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 A0A1W2PR77 199 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 TRAF3IP2O43734 574 aaPredicted RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 FCGR3BO75015 233 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 CA11O75493 328 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 NAPSAO96009 420 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 OR5G3P0C626 314 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 FOLR2P14207 255 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 NUBP1P53384 320 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 ACOT6Q3I5F7 207 aaPredicted RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 UNQ5815/PRO19632Q6UWF5 114 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 SLC35E3Q7Z769 313 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 SELENOHQ8IZQ5 122 aaKnown RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 HS3ST6Q96QI5 342 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 RNF122Q9H9V4 155 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 WASHC3Q9Y3C0 194 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 LOC102723971A0A1B0GUV8 181 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 CDIPTO14735 213 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 TSPAN2O60636 221 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 ZG16O60844 167 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 TMEM127O75204 238 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 CA1P00915 261 aaPredicted RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 NGFP01138 241 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 OR10J1P30954 320 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 LHFPL2Q6ZUX7 228 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 DOLPP1Q86YN1 238 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 OR4A16Q8NH70 328 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 Q96M66 194 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 RASL10BQ96S79 203 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 RIMS4Q9H426 269 aaPredicted RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 SPG11Q96JI7 2443 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 ADAMTS9Q9P2N4 1935 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 TNRC6BQ9UPQ9 1833 aaKnown RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 A0A0G2JRQ6 117 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 B4DEV8 164 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 BMPR1BO00238 502 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 HRASP01112 189 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 HLA-GP17693 338 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 HOXC12P31275 282 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 IL24Q13007 206 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 JOSD1Q15040 202 aaPredicted RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 MSMO1Q15800 293 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 LCN12Q6JVE5 192 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 RPS19BP1Q86WX3 136 aaKnown RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 SPACA9Q96E40 222 aaPredicted RBP7.55□□□□□ -1.2
RTN4-206ENST00000394611 MRGPRX4Q96LA9 322 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 TECTBQ96PL2 329 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 CDH20Q9HBT6 801 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 SLC35D1Q9NTN3 355 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 PILRBQ9UKJ0 227 aa7.55□□□□□ -1.2
RTN4-206ENST00000394611 PCDH15Q96QU1 1955 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 MUC6Q6W4X9 2439 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 TRBV6-7A0A0A0MS04 114 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 EFNA2O43921 213 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 SERF1AO75920 110 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 PIAS2O75928 621 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 IGHEP01854 428 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 RPL19P84098 196 aaKnown RBP7.54□□□□□ -1.2
RTN4-206ENST00000394611 MRGPRGQ86SM5 289 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 LEAP2Q969E1 77 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 PTX4Q96A99 478 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 NOL4LQ96MY1 436 aaPredicted RBP7.54□□□□□ -1.2
RTN4-206ENST00000394611 ARRDC1-AS1Q9H2J1 176 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 MYOZ1Q9NP98 299 aaPredicted RBP7.54□□□□□ -1.2
RTN4-206ENST00000394611 ZNF107Q9UII5 783 aaPredicted RBP7.54□□□□□ -1.2
RTN4-206ENST00000394611 DYSFO75923 2080 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 IGKV1-12A0A0C4DH73 117 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 IGKV1D-12P01611 117 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 RPL23P62829 140 aaKnown RBP7.54□□□□□ -1.2
RTN4-206ENST00000394611 PNRC1Q12796 327 aaPredicted RBP7.54□□□□□ -1.2
RTN4-206ENST00000394611 SLC24A4Q8NFF2 622 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 ZC2HC1AQ96GY0 325 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 ACY3Q96HD9 319 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 IGHV3-21A0A0B4J1V1 117 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 SLC22A20A6NK97 555 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 A8MWP6 167 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 SYNGR4O95473 234 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 FOXA3P55318 350 aaPredicted RBP7.54□□□□□ -1.2
RTN4-206ENST00000394611 MIC13Q5XKP0 118 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 FDX2Q6P4F2 183 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 GUSBP11Q6P575 273 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 SPSB3Q6PJ21 355 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 ZNF826PQ6ZT77 177 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 OR4P4Q8NGL7 312 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 DEPPQ9NTK1 212 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 TUBD1Q9UJT1 453 aa7.54□□□□□ -1.2
RTN4-206ENST00000394611 TMEM131Q92545 1883 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 A0A1B0GU03 582 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 CDS2O95674 445 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 F2RP25116 425 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 CDKN1AP38936 164 aa7.53□□□□□ -1.2
RTN4-206ENST00000394611 FUT6P51993 359 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms