RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PRR7Q8TB68 274 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 TAF15Q92804 592 aaKnown RBP eCLIP8.98□□□□□ -0.97
NUP188-201ENST00000372577 MS4A10Q96PG2 267 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 SIGLEC12Q96PQ1 595 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 SOSTQ9BQB4 213 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 TDRD6O60522 2096 aaKnown RBP8.98□□□□□ -0.97
NUP188-201ENST00000372577 RIGQ13278 110 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 TMEM183BQ1AE95 376 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 A0A1B0GTI1 187 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 RAMP1O60894 148 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 P01737 135 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 FAM157CP0CG43 387 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 PMCHP20382 165 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 MMDQ15546 238 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 RHOVQ96L33 236 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 RSRP1Q9BUV0 290 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 C19orf24Q9BVV8 132 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 PXMP4Q9Y6I8 212 aa8.98□□□□□ -0.97
NUP188-201ENST00000372577 IGKV1D-43A0A0B4J1Z2 117 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 C17orf51A8MQB3 221 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 NTN3O00634 580 aaPredicted RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 SMIM6P0DI80 62 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 MUC1P15941 1255 aaPredicted RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 CRISP2P16562 243 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 TNFRSF9Q07011 255 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 ARG1P05089 322 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 CEACAM1P13688 526 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 USF1P22415 310 aaPredicted RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 ERVS71-1P61550 626 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 HSPE1P61604 102 aaKnown RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 RPL8P62917 257 aaKnown RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 ZNF826PQ6ZT77 177 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 CBLN2Q8IUK8 224 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 MS4A7Q9GZW8 240 aaPredicted RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 PRDM6Q9NQX0 595 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 HIGD1AQ9Y241 93 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 SLC31A2O15432 143 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 LINC00271P0C7V0 271 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 SRP14P37108 136 aaKnown RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 IFITM2Q01629 132 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 SPNS3Q6ZMD2 512 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 TMEM186Q96B77 213 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 MIOXQ9UGB7 285 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 RNF115Q9Y4L5 304 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 SMPD2O60906 423 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 ADAM11O75078 769 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 HYPMO75409 117 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 CYB5R3P00387 301 aaPredicted RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 CFDP00746 253 aaPredicted RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 NPBWR2P48146 333 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 MEOX2P50222 304 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 RNASEKQ6P5S7 137 aaKnown RBP8.97□□□□□ -0.97
NUP188-201ENST00000372577 FDCSPQ8NFU4 85 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 OR11H4Q8NGC9 324 aa8.97□□□□□ -0.97
NUP188-201ENST00000372577 LOC102723971A0A1B0GUV8 181 aa8.96□□□□□ -0.97
NUP188-201ENST00000372577 CXorf66Q5JRM2 361 aaPredicted RBP8.96□□□□□ -0.97
NUP188-201ENST00000372577 C1QTNF12Q5T7M4 302 aa8.96□□□□□ -0.97
NUP188-201ENST00000372577 TOMM20LQ6UXN7 152 aa8.96□□□□□ -0.97
NUP188-201ENST00000372577 PQLC2Q6ZP29 291 aa8.96□□□□□ -0.97
NUP188-201ENST00000372577 PSMG3Q9BT73 122 aaPredicted RBP8.96□□□□□ -0.97
NUP188-201ENST00000372577 PITPNC1Q9UKF7 332 aa8.96□□□□□ -0.97
NUP188-201ENST00000372577 FAM3BP58499 235 aaPredicted RBP8.96□□□□□ -0.97
NUP188-201ENST00000372577 TUSC1Q2TAM9 212 aa8.96□□□□□ -0.97
NUP188-201ENST00000372577 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.96□□□□□ -0.97
NUP188-201ENST00000372577 PRSS3P2Q8NHM4 247 aa8.96□□□□□ -0.97
NUP188-201ENST00000372577 PARD6AQ9NPB6 346 aa8.96□□□□□ -0.97
NUP188-201ENST00000372577 CISD1Q9NZ45 108 aaKnown RBP8.96□□□□□ -0.97
NUP188-201ENST00000372577 MPZP25189 248 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 TNFSF10P50591 281 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 PMS2P11Q13670 270 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 ZNF818PQ6ZRF7 136 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 TPRX1Q8N7U7 411 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 PAXXQ9BUH6 204 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 SEMA5BQ9P283 1151 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 VWA8A3KMH1 1905 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 CEACAM18A8MTB9 384 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 B9A039 149 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 PTBP3O95758 552 aaKnown RBP8.96□□□□□ -0.98
NUP188-201ENST00000372577 WDR81Q562E7 1941 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 OR2T8A6NH00 312 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 FAM157AC9JC47 383 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 ISLRO14498 428 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 DANCRP0C864 163 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 MEF2BQ02080 365 aaPredicted RBP8.96□□□□□ -0.98
NUP188-201ENST00000372577 ZNF788Q6ZQV5 615 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 OR9G1Q8NH87 305 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 NPAS1Q99742 590 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 TMEM140Q9NV12 185 aa8.96□□□□□ -0.98
NUP188-201ENST00000372577 FNDC1Q4ZHG4 1894 aaPredicted RBP8.95□□□□□ -0.98
NUP188-201ENST00000372577 MARCH11A6NNE9 402 aa8.95□□□□□ -0.98
NUP188-201ENST00000372577 HLA-DRB5Q30154 266 aa8.95□□□□□ -0.98
NUP188-201ENST00000372577 SSX7Q7RTT5 188 aa8.95□□□□□ -0.98
NUP188-201ENST00000372577 TEX29Q8N6K0 151 aa8.95□□□□□ -0.98
NUP188-201ENST00000372577 GTF3AQ92664 365 aaKnown RBP8.95□□□□□ -0.98
NUP188-201ENST00000372577 TMUB1Q9BVT8 246 aa8.95□□□□□ -0.98
NUP188-201ENST00000372577 SCNM1Q9BWG6 230 aa8.95□□□□□ -0.98
NUP188-201ENST00000372577 MGAMO43451 1857 aa8.95□□□□□ -0.98
NUP188-201ENST00000372577 PTPRZ1P23471 2315 aaPredicted RBP8.95□□□□□ -0.98
NUP188-201ENST00000372577 TEX50A0A1B0GTY4 177 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms