RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 C1QL2Q7Z5L3 287 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 OR2J1Q9GZK6 312 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 RPRMQ9NS64 109 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 A0A087WV48 116 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 A0A087WWC5 75 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 F8VVB4 439 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 F8VWA3 439 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 LYRM7Q5U5X0 104 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 FSCN3Q9NQT6 498 aa13.71□□□□□ -0.21
COL17A1-202ENST00000369733 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.22
COL17A1-202ENST00000369733 HARBI1Q96MB7 349 aa13.71□□□□□ -0.22
COL17A1-202ENST00000369733 PSMG3Q9BT73 122 aaPredicted RBP13.71□□□□□ -0.22
COL17A1-202ENST00000369733 REG4Q9BYZ8 158 aa13.71□□□□□ -0.22
COL17A1-202ENST00000369733 HES3Q5TGS1 186 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 TPRX1Q8N7U7 411 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 LSM10Q969L4 123 aaKnown RBP13.7□□□□□ -0.22
COL17A1-202ENST00000369733 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 AMY1AP04745 511 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 WDR54Q9H977 334 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 A0A1W2PPE3 182 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 UBE2CO00762 179 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 RAB29O14966 203 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 TMPRSS2O15393 492 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 ARL14EPLP0DKL9 152 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 PQLC2Q6ZP29 291 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 GFI1Q99684 422 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 GLRX2Q9NS18 164 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 DCAF16Q9NXF7 216 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 IGFBP3P17936 291 aaPredicted RBP13.7□□□□□ -0.22
COL17A1-202ENST00000369733 SFRP2Q96HF1 295 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 BRWD1Q9NSI6 2320 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 PRRX1P54821 245 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 LEMD1Q68G75 181 aa13.7□□□□□ -0.22
COL17A1-202ENST00000369733 RCC1LQ96I51 464 aaKnown RBP13.7□□□□□ -0.22
COL17A1-202ENST00000369733 ZG16O60844 167 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 IGHV3OR15-7A0A075B7D8 119 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 TMEM250H0YL14 139 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 CA2P00918 260 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 SRIP30626 198 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 UBALD2Q8IYN6 164 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 OR1L8Q8NGR8 309 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 DLL3Q9NYJ7 618 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 GAGE10A6NGK3 116 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 COX7A1P24310 79 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 FXYD3Q14802 87 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 GALNT14Q96FL9 552 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 ASCL3Q9NQ33 180 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 ZFP30Q9Y2G7 519 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 OR2T8A6NH00 312 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 NPIPB13A6NJU9 1138 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 NPIPB4C9JG80 1138 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 NPBWR2P48146 333 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 UFC1Q9Y3C8 167 aa13.69□□□□□ -0.22
COL17A1-202ENST00000369733 TCTAP57738 103 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 KIAA1644Q3SXP7 199 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 FBXW9Q5XUX1 488 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 C12orf54Q6X4T0 127 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 CELA2AP08217 269 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 CTAG1AP78358 180 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 SPRED2Q7Z698 418 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 UQCRFS1P47985 274 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 TM2D1Q9BX74 207 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 NYNRINQ9P2P1 1898 aaKnown RBP13.68□□□□□ -0.22
COL17A1-202ENST00000369733 A0A0G2JMZ2 1700 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 LRRC37A2A6NM11 1700 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 A8MWL6 223 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 GNB2P62879 340 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 BHLHA15Q7RTS1 189 aaPredicted RBP13.68□□□□□ -0.22
COL17A1-202ENST00000369733 OR1L1Q8NH94 360 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 TMEM45BQ96B21 275 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 SCARF2Q96GP6 870 aaPredicted RBP13.68□□□□□ -0.22
COL17A1-202ENST00000369733 OTOFQ9HC10 1997 aa13.68□□□□□ -0.22
COL17A1-202ENST00000369733 H0YIZ8 118 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
COL17A1-202ENST00000369733 ZNF735P0CB33 412 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 SLC35E4Q6ICL7 350 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 GBGT1Q8N5D6 347 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 CLDND2Q8NHS1 167 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 TMEM140Q9NV12 185 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 PRR32B1ATL7 298 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 CLDN14O95500 239 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 RASL11BQ9BPW5 248 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 IGKV1D-43A0A0B4J1Z2 117 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 VENTXO95231 258 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 PRDX2P32119 198 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 NMUP48645 174 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 ARL6IP6Q8N6S5 226 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 RNF7Q9UBF6 113 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 EGR1P18146 543 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 RTP5Q14D33 572 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 MMD2Q8IY49 270 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 SAXO1Q8IYX7 474 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 WNT16Q9UBV4 365 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 LYPD3O95274 346 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 PRNTQ86SH4 94 aa13.67□□□□□ -0.22
COL17A1-202ENST00000369733 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.66□□□□□ -0.22
COL17A1-202ENST00000369733 LOC389332A0A1B0GUA5 103 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 CBLN1P23435 193 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 DOLPP1Q86YN1 238 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 ATOH7Q8N100 152 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms